Gene Slin_2622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2622 
Symbol 
ID8726367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3169092 
End bp3170657 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content57% 
IMG OID 
Productprotein of unknown function DUF303 acetylesterase putative 
Protein accessionYP_003387438 
Protein GI284037508 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.259122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTGT CGCCACAGAA AAGTAACCTG CGCCATTGGT TCGTGTGCGT TCTCCTGGTC 
TGGGCATCCC TCTGCCCGGC TTATGCTCAA CTCCGTCTGG CCAGTGACTG GCAAAGCGGG
ATGGTCATCC AGCGCGACAG AACCATACCT GTCTGCGGGT GGGCTATTCC CGGTCAAACG
GTGCGGGTTC ATTTGGGAGC CGAACAAGGT CAGACCGTTG TGCGCGCCGA TTCAAGCTGG
TCGCTTCAAT TACGTCCCCA GGCCGCTTTG GCATCACCCA TCCGGCTCAC CATTCGGACG
GATCAGGACA CCCTTCAACT GACGAACCTA CTGATCGGCG ATGTGTGGAT TTGTGCGGGC
CAGTCGAATA TGGCCTTCCC GGTGGCCAGC GATCAGTTTG CCGCACAGAC GCTCCGCCAA
TCCGGAAACG GGTCGCTACG GCTTTTCAAT AAACTTCCGG CGCTGTCAAC GTACAACGTA
GCGTATAAAC CGAACGAACT TTCGCATCTG CATCCGGACG CGTTTTACAA ACCGGCGAGC
TGGCAGGAAG CCGACTCGCT GGCTATCCGG TTGTTTTCGG CGGTCGGGTA TTATTTCGGG
CAAGCGGTTC AGCAATCGCT CAACATTCCC ATTGGATTGA TCAATGTGGC CGTTGGCGGC
TCCCCAACCG AAGCCTGGAT GCGCCCCGGC AGTGGCCTTG CTGACCCAAC GATACAACCC
GTATTCAAGG GCGACTGGTG GCAGAATCCC GTTCTGGAAC CCTGGTGTAT TCAGCGCGGC
CACGAAAATC TGGATAACCT GATTCAGGCA GGCTATAAAC CGCCCCATGA TTCACTGGGG
TATCATCACC CGTTTAAGCC GGGCTTTCTC TACCAGGCGG CTATTGTGCC ACTACTTCGG
TTGCCCATCC GGGGCGTTCT CTGGTATCAG GGCGAAAGTA ATGCCCTGAG CCTGGCGAGG
GCGCAGCAGC ATGGACACCT GTTTGCCCGT TTAGTAGGGG ATTGGCGAGA CCAGTGGCAG
CAGGGCGACT TCCCTTTTTA TGTCTGTCAG CTTTCCTCCA TTGGTACCGA AAAAGGGTAT
AAGTCCGAGA ACTGGCCCTG GTTTCGGGAC AGCCAGCGTC GACTGGCGCA GCGGCTCCCT
AATGTTGGTA TGGCCGTTAC CAGCGATGTG GGTAACCCGA CAGACGTTCA CCCAACCAAC
AAACGGGTTG TTGGCCAACG ACTGGCGCGG GAAGCGCTGG TCAAAACGTA TGGGCAGCAG
GCCGTACTGA CCCCTGAGAT CGTCGAGGTC GCCCGGGTCA GAAACGGGAT TACCCTACGC
TTCCGACAAA CGGGGACTGG GCTGCGGACG GCAGACAACC AGTCTATTCG TGGCTTTTCA
GTTGGTGACG TCAACGGCCC TCGTCAGGAC GTATCAGCCC GATGTCGGGG CAATCAGGTG
TTTCTTAGCC TTCCCAACGG CGCATCGTGT ACCCATGTAT ATTATGGCTG GGCACCGTAC
ACGACCGCCA ATCTCATCAA CAGTGCCGGT TTGCCCGTCA CTACATTCTC CTACGCTATT
CCATGA
 
Protein sequence
MILSPQKSNL RHWFVCVLLV WASLCPAYAQ LRLASDWQSG MVIQRDRTIP VCGWAIPGQT 
VRVHLGAEQG QTVVRADSSW SLQLRPQAAL ASPIRLTIRT DQDTLQLTNL LIGDVWICAG
QSNMAFPVAS DQFAAQTLRQ SGNGSLRLFN KLPALSTYNV AYKPNELSHL HPDAFYKPAS
WQEADSLAIR LFSAVGYYFG QAVQQSLNIP IGLINVAVGG SPTEAWMRPG SGLADPTIQP
VFKGDWWQNP VLEPWCIQRG HENLDNLIQA GYKPPHDSLG YHHPFKPGFL YQAAIVPLLR
LPIRGVLWYQ GESNALSLAR AQQHGHLFAR LVGDWRDQWQ QGDFPFYVCQ LSSIGTEKGY
KSENWPWFRD SQRRLAQRLP NVGMAVTSDV GNPTDVHPTN KRVVGQRLAR EALVKTYGQQ
AVLTPEIVEV ARVRNGITLR FRQTGTGLRT ADNQSIRGFS VGDVNGPRQD VSARCRGNQV
FLSLPNGASC THVYYGWAPY TTANLINSAG LPVTTFSYAI P