Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2573 |
Symbol | |
ID | 8726318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3111518 |
End bp | 3113602 |
Gene Length | 2085 bp |
Protein Length | 694 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003387390 |
Protein GI | 284037460 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0435941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.40806 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAGCT TATACATTAT TCCCCTTATT CTGTTTGTCA TTTATGTCGG ACGGCTTGCC TCGCAGATTT GCCGACGCTC CCTGACAGAA TGGTGGCTGA CAACATTTTT GCTGGGTGCC GGTAGCGTTA TTTTTACGGG CTTCGTGCTA TCCGCCCTGT ATCTGACGGC CAACGCACCG GTTTGGGCGG GTTCGGTATT TATTACGGCA ACGCTTCTCG GCAAACTGTT AAGTCGCCTG TCTGGCCAGA ATACCGGTTT TTCGGTCAGA AAACTCGTTG AGGAACGTTT TCAAACGGGC AAGAACTGGT TCGCCGAGTT GTCAGCCTAC TCCCGCTTTC TGTTCATACT GCTCTTCAGC ACAGTAGGCA TCATTGCCGT CACTAACCTC CTGCTGGTAT TCTTTACCGT TCCTAATGAA TGGGATAGCA TGACCGGCCA CCTGAACCGC GTGATGCAAT ACATACAGCG GGGTACCATG CGTCATTTCG GGGGAACGAA CTGGAACATG GATACGTATC CGAAGAGCGT TTGTACCCTT CAGATTTATT CGTTTCTGAT GACCGGCCAT TTTGAGAATG GCTTCAAATT TATTCATCAC CTGAGCTACT GGACAGCCAT TGTTGCCGTT TTTGGTATTG TACAGCGCAT TGGTCATAAC CGGCTATCAG CTAGTTTTTT CTGTGCGTTG GCGTATGCCC TGCTTCCCGA TTTTCTGATG CAGGCGATCA CCACCGAAAC CGACATTGTT CTGACTGCCT ACCTAAGCGT ATTGCTATAC ATGCTGTTCA CGTACCGCAC GATCGGTGTG CAAACGGCCG ATAGCCGGTA TCTATACCTG GCAGGTATGG CGTTTGGGAT TGCGTTTGGA CACAAAATCA CCTTTGCCTT GCTGTTACCT TCCGTATTCG TCATCATGAT TTATACGGTT TTCTTGTCGC GTTCGTGGAC TATAACGTTC GGGCGGGTAT GGCGTCTGGG GCTGGCAATC GGGGTTGGAG TTTGCCTGTG GACACTCCCG ACCGGCTACC TCAAAAACAT TGAAGTCTTT GGTCACCCGA TTGGTCCTCC AACGGCCCTT AAACACCAAT CTGTGGAGCG GGCTGGTTCT CTCTCCAACT TACTTGAACA GGGAAGCCGC AATGTGGTTC GGTACGCCTA CGACCATGTG AATCTGGACG GCATCCGAAA CGTTAAAGCC GGTGCCGACC TGAACCATGC CATGCGCAAG CCGCTGGTAT TGCTGGAAGA CAAACTGCAT ATGCGGCTGG ATGAAGAAAC CGACTTTTCG ATTCAGGTGT TTGCCTTCGA TCGAAAGTTT GTGTTTTATA ACGCCAATCC CTATTGGGGT ATTTTCGGGT TTGGGTTGAT CTTGCCGCTA TTGGTGCTGG TATTGGTGGG CTTCATTCGC TCAACCCCGC ACATCTATTT AGGGATTGCC CTTTTGCTCC ATTTTGCAGC TTTATCCTAT TCGGCCCCAT ATGACCCCTT CAAAGGACGT TATTTTATAG AAACAGGGCT GTTCGGTGTT ACCTTTCTGG CACTGTTGTT TCTCCACCCA CGCGCAACCG TCGATGTACC CAACCGACCG ATCTGGAAAG GTTATGTTGC TCTCGTTACG GTAGTGGGCT GCCTGTCGGC ACTCATGTGC GTCTTCCTGA ACACCCGTGC GCTACCATTC GCCTGGACGG GGCCCGATGG CATTCCTTTC CCGTCGGCAT TCACATCTGA CAGAATCCGG CAGATAACCA TTGGCCGACC TGACACCTAC ATTCCCTACA AACGCTTCGA TGAGTTGGTA CCCGATAGTG CGACCGTCGC GCTGGCAACC ATCAACGATG ACTATGAGTA CCCGCTCTAC GGACCCAAAT TATCCCGTCG ATTAATAGCT ATCAACCCGT TTGAACAAGG ACTTAAACCA ATTCCGAAAG AGGCCGATTA CCTGTTTTTC GACAAGAGCG TTATTTCACC CCAACCCGGC GACATACGTC TGGGTACCGA TACTACTCTG CGCGCCAGAA TGATCGTACC GGGAGAAGAT TATTATTTAC GGAAACTGAA AAAAGGAGTT AGGGGCGAGA AGTGA
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Protein sequence | MSSLYIIPLI LFVIYVGRLA SQICRRSLTE WWLTTFLLGA GSVIFTGFVL SALYLTANAP VWAGSVFITA TLLGKLLSRL SGQNTGFSVR KLVEERFQTG KNWFAELSAY SRFLFILLFS TVGIIAVTNL LLVFFTVPNE WDSMTGHLNR VMQYIQRGTM RHFGGTNWNM DTYPKSVCTL QIYSFLMTGH FENGFKFIHH LSYWTAIVAV FGIVQRIGHN RLSASFFCAL AYALLPDFLM QAITTETDIV LTAYLSVLLY MLFTYRTIGV QTADSRYLYL AGMAFGIAFG HKITFALLLP SVFVIMIYTV FLSRSWTITF GRVWRLGLAI GVGVCLWTLP TGYLKNIEVF GHPIGPPTAL KHQSVERAGS LSNLLEQGSR NVVRYAYDHV NLDGIRNVKA GADLNHAMRK PLVLLEDKLH MRLDEETDFS IQVFAFDRKF VFYNANPYWG IFGFGLILPL LVLVLVGFIR STPHIYLGIA LLLHFAALSY SAPYDPFKGR YFIETGLFGV TFLALLFLHP RATVDVPNRP IWKGYVALVT VVGCLSALMC VFLNTRALPF AWTGPDGIPF PSAFTSDRIR QITIGRPDTY IPYKRFDELV PDSATVALAT INDDYEYPLY GPKLSRRLIA INPFEQGLKP IPKEADYLFF DKSVISPQPG DIRLGTDTTL RARMIVPGED YYLRKLKKGV RGEK
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