Gene Slin_2572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2572 
Symbol 
ID8726317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3110312 
End bp3111421 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content50% 
IMG OID 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_003387389 
Protein GI284037459 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0129477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.660703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAATG TCACGAAATC TTATCTGCCA GAACTCGACG AGTATACTGC CTACTTGAAA 
GGTATCTGGG AGCGTGTTCA TTTGACGAAC GATGGGCCAC TTCTGCGCAG GCTGGAAGAT
GAGCTGAAGG AGTTTCTGGA TGTAAAATAC CTGAAATTCT GCACCAATGG CACCATTGTG
CTTCAGATGG CTCTCAAAGC ATTGGACATA AAGAAAGAAG TCATCACAAC ACCCTTTTCC
TACGTGGCTA CGACGAACGC GCTACTCTGG GAAGGCTGCA CACCTGTATT CGCCGACATC
AGCCCGGATG ATTACAACAT CGATCCGGAG AAGATCGAAC CGCTGATTAC GGCCGATACG
CAGGCAATTA TGGCCACGCA TGTGTATGGC AATGCGTGTA AGATCGAACA GATCCAGGCC
ATCGCTGATA AATATAATTT AAAAGTTATT TACGATGCAG CCCATACATT TGGGGCAAGT
TACAACGGCA AGTCTATCTT GAGTTACGGC GACCTGAGCA CCTGTAGCTT TCACGCTACC
AAGGTATTCC ATACCGTTGA AGGAGGTTGT ATCGTAACCA ACGATGCTGA CATGGCCCAG
AAGCTGCACT ACATGCGGTC GTTCGGGCAT CAGAATGATA ACTACTACGG TGTTGGCATC
AACGCCAAAA ACTCGGAGTT ACATGCCGCC ATGGGTTTGT GCGTGCTGCC AAAAGTACCC
GAGTTGATTG CCGCCCGTAA AGAACGATTC GGGTATTACG ACAATCAGCT GGATTTCAGT
AAAATAACCC GGCCTACCCT GACGCCCGGT GTCGATTATA ACTACGCCTA TTATCCGGTA
ATTTTCGATT CTGAAGAGAC GCTGTTACGG GTAACTGATG CCCTCAAGGC AGAAGACGTT
ATGCCGCGCC GGTACTTTTA TCCTTCGCTC AACACCTTGC CCTTTACCTT CAGGCCGGGT
ACGACAACAG CGCAACCCTG TCCGGTTTCG GAAGATGTAT CCTTGCGGGT GCTGTGCCTG
CCCCTTTACC CTGATCTGGC CGAAGCAGAT GTTGACCGCA TTGTTGCGAC TGTCAATCTG
GCCGTCGGTA TCGTACCCGA AAGCGTATAA
 
Protein sequence
MINVTKSYLP ELDEYTAYLK GIWERVHLTN DGPLLRRLED ELKEFLDVKY LKFCTNGTIV 
LQMALKALDI KKEVITTPFS YVATTNALLW EGCTPVFADI SPDDYNIDPE KIEPLITADT
QAIMATHVYG NACKIEQIQA IADKYNLKVI YDAAHTFGAS YNGKSILSYG DLSTCSFHAT
KVFHTVEGGC IVTNDADMAQ KLHYMRSFGH QNDNYYGVGI NAKNSELHAA MGLCVLPKVP
ELIAARKERF GYYDNQLDFS KITRPTLTPG VDYNYAYYPV IFDSEETLLR VTDALKAEDV
MPRRYFYPSL NTLPFTFRPG TTTAQPCPVS EDVSLRVLCL PLYPDLAEAD VDRIVATVNL
AVGIVPESV