Gene Slin_2526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2526 
Symbol 
ID8726270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3047801 
End bp3048853 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content54% 
IMG OID 
ProductRieske (2Fe-2S) iron-sulphur domain protein 
Protein accessionYP_003387343 
Protein GI284037413 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.672374 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0193911 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTAC ACTACAGCCC CGTTCTCTGG AATCGGCAAA AACGACGGTA TGATCTGGTG 
CTGGCCGGTA TCGTCTGGCT ATACCTGGTC GTTTTCAGTA CGCTGCAAGC CGTTTTATTT
CCACAGGTCA CCTTCGAAAC CGTGCTCATT CGAGCAACTA GCACGCTGGC GTTTTTCCTG
TTGCATATTG TCCTGATCAT CGGCCCACTC TGCCGCCTGG ATCATCGTTT TCTGCCTTTG
TTGTATAACC GGCGGCATCT GGGTGTGGTC ACGTTTCTGG TCGCTGGGGT GCATGGGGTA
TTCAGCCTCA TCCAGTTTCA CGCGCTCAGT AATGTCAATC CACTGGTATC GCTGTTTAGT
TCAGAGAAAG AGTATGGTCG GCTTTCGGAG TTCCCGTTTC AGCCGCTGGG CTTTTTCGCT
TTGCTGATTC TGTTTCTGAT GGCCGCTACC AGCCACGATT TCTGGCTAAA GAACCTAAGT
CCGCGTGTCT GGAAAGCGTT ACACATGAGT GTTTATCTGG CCTACGGGCT GATTGTCCTG
CACGTGGCTA TGGGTATTTT GCAGCAGGAA ACATCGGCTG TATATGCGGC AATTGTTGGT
CTAGGACTGT TGACAATCAT CAGTCTGCAC CTGATGGCAG CGTTTCGGGC GCAGCGTCAT
GATCTTCATC CAGCGGGGCC GGAAGCCGAC GGTTTTGTGG CCGTTTGTAC TGTCGACGAC
ATTCCCATGA ACCGGGCCAA AACACTGCTC ATCAATGGGG AGAATATTGC CGTGTTTCGG
TACGACGATA CCGTGTCGGC AGTAAGCAAC CTATGCCGCC ATCAGAACGG GCCGCTGGGC
GAAGGGAAGA TCATCGACGG TTGCATTACC TGTCCCTGGC ACGGCTACCA GTATCTACCC
CAAAACGGGC AGTCTCCCCC ACCCTTTCAG GAAAAAATCG AGACCTACAC CGTGCGTTGC
CTCGACGGAA CCGTTTGGGT AAATCCAACC CCTCATCCGC CCGGTACAGC ACAGCCACCG
GCATCCATCC ACGCATCACT CTCCCGCTCA TGA
 
Protein sequence
MALHYSPVLW NRQKRRYDLV LAGIVWLYLV VFSTLQAVLF PQVTFETVLI RATSTLAFFL 
LHIVLIIGPL CRLDHRFLPL LYNRRHLGVV TFLVAGVHGV FSLIQFHALS NVNPLVSLFS
SEKEYGRLSE FPFQPLGFFA LLILFLMAAT SHDFWLKNLS PRVWKALHMS VYLAYGLIVL
HVAMGILQQE TSAVYAAIVG LGLLTIISLH LMAAFRAQRH DLHPAGPEAD GFVAVCTVDD
IPMNRAKTLL INGENIAVFR YDDTVSAVSN LCRHQNGPLG EGKIIDGCIT CPWHGYQYLP
QNGQSPPPFQ EKIETYTVRC LDGTVWVNPT PHPPGTAQPP ASIHASLSRS