Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2506 |
Symbol | |
ID | 8726250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 3025758 |
End bp | 3026642 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003387323 |
Protein GI | 284037393 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.108721 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCAAC CGCTTTTTCC CAGTTATACC ATCGGCCACT TCATCAATCA GCCCGCCAAC CCAACCGAGT TTGAGTTGAT GCGCTTTGAG ACAATGGCTG AGCCGGAGGT AGAGGATTTG CATCGACATA CATTCTACGA AATTATCTGG GTCGATGCGG GCCGGAGCCG ACAGACAATC GACTATCAGG AATACCAGCT CTCGCCCGAG TCCCTATTTT TTATCTCACC CGGCCAATTG CATTATTTCG AAGAGTGGGA ACCCCTGCGC GGTGGAAGTA TACTGTTTAC CGAGGACTTT TTTCTGCTCA ATCAACAAAA CAAGGATAAA CTCTTTGAAC TGAGCTTTCT GGATAATTTC TACGCCAATC CGCTTCTTAC GCCAAATTCA GCTGATTTTA GCGAAATGCG TCAAACCATC GAACTGCTGG ACCGCGAACA CCATCGTCCT GACTATGTGC CCACTATTGC TCAATCGCTG CTGCATGTGC TGCTGGCCCA GATTCAGCGG TGTGTGAATG CGCAACTGGA CCGTCAGACA CCCCAGCGGT ACGTCATTCA ATATAAACTG CTGAAAAACC TGCTCGATAA ACACTTTGCC GACAACCAGC CCGTTCATTT CTACGCGTCG GCTTTACACA TCACGCCCCA CCACCTCAAT CTGGTTTGCC GACAGGTGAC GGGCCAAACG GCCAGTGATG TTATTCGGGC TCGCAGTATA TTGGAAGCCA AGCGGTTGCT GACCTTTACC GATCTAACCG TAACGGAGGT GGCTAGTCGG CTTACTTTTA TGGACCCATC CTATTTTGCC CGCGTTTTTC GGACTGAGAC GGGAATGTCG CCAGCGGGTT TCAAACAAAC GATGTCCGAT TTGTACCGGC TTTAG
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Protein sequence | MPQPLFPSYT IGHFINQPAN PTEFELMRFE TMAEPEVEDL HRHTFYEIIW VDAGRSRQTI DYQEYQLSPE SLFFISPGQL HYFEEWEPLR GGSILFTEDF FLLNQQNKDK LFELSFLDNF YANPLLTPNS ADFSEMRQTI ELLDREHHRP DYVPTIAQSL LHVLLAQIQR CVNAQLDRQT PQRYVIQYKL LKNLLDKHFA DNQPVHFYAS ALHITPHHLN LVCRQVTGQT ASDVIRARSI LEAKRLLTFT DLTVTEVASR LTFMDPSYFA RVFRTETGMS PAGFKQTMSD LYRL
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