Gene Slin_2375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2375 
Symbol 
ID8726119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2863323 
End bp2863964 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content49% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003387194 
Protein GI284037264 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.852027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGTTT TACAGCCTCC TATCATCCAA AAGCCTTTCG TTGTGCTACC GAACGAGCAG 
GACATCCTTT CGGCCATAAG CAATGGCAAT GAGCGTGCGT TTGAGTCTGT CTTTCGGCAG
TACTATGCAC CCCTTTGCCG CTATGCCCGG CAGTTAGTGC CCGACCCCGA CGAGGCCGAA
GAGGAAGTAC AGGCCATGTT TTTGACCGTT TGGGAAAAAC GGGAGAATCT AAATATTACC
ATTTCGCTGA AAGCTTATCT GTACCGGGCC GTGCACAACC GGTGCCTGAA TCGAATAAAA
CACATTTCCG TTCGGGATGA ACACCGGGAG CACAGCCGTT ATCTGGGCGA ATCGCTGGTT
GAGTCGCCCA TGCAGACACT TTTGGGCGAC GAACTTTCTG ACCGGTTGCA GCGAACTATT
CAGAAATTAC CCGAACAATG TCGGCTGGCA TTTACGTTAA GTCGCTTTGA CGAGTTAAAA
TATGGAGAAA TTGCCGATCA GCTGGGTATT TCAATTAAAA CCGTTGAGAA CCAGATCGGG
AAAGCCCTGC GCATTTTACG TACTGAACTG AGTGAGTATT TACCTGTTTT AATCCTGTGG
CTGCTAAGTC ACCCTGAGCA ATGGCCGATC AACAACCCAT AG
 
Protein sequence
MIVLQPPIIQ KPFVVLPNEQ DILSAISNGN ERAFESVFRQ YYAPLCRYAR QLVPDPDEAE 
EEVQAMFLTV WEKRENLNIT ISLKAYLYRA VHNRCLNRIK HISVRDEHRE HSRYLGESLV
ESPMQTLLGD ELSDRLQRTI QKLPEQCRLA FTLSRFDELK YGEIADQLGI SIKTVENQIG
KALRILRTEL SEYLPVLILW LLSHPEQWPI NNP