Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2375 |
Symbol | |
ID | 8726119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2863323 |
End bp | 2863964 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003387194 |
Protein GI | 284037264 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.852027 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGTTT TACAGCCTCC TATCATCCAA AAGCCTTTCG TTGTGCTACC GAACGAGCAG GACATCCTTT CGGCCATAAG CAATGGCAAT GAGCGTGCGT TTGAGTCTGT CTTTCGGCAG TACTATGCAC CCCTTTGCCG CTATGCCCGG CAGTTAGTGC CCGACCCCGA CGAGGCCGAA GAGGAAGTAC AGGCCATGTT TTTGACCGTT TGGGAAAAAC GGGAGAATCT AAATATTACC ATTTCGCTGA AAGCTTATCT GTACCGGGCC GTGCACAACC GGTGCCTGAA TCGAATAAAA CACATTTCCG TTCGGGATGA ACACCGGGAG CACAGCCGTT ATCTGGGCGA ATCGCTGGTT GAGTCGCCCA TGCAGACACT TTTGGGCGAC GAACTTTCTG ACCGGTTGCA GCGAACTATT CAGAAATTAC CCGAACAATG TCGGCTGGCA TTTACGTTAA GTCGCTTTGA CGAGTTAAAA TATGGAGAAA TTGCCGATCA GCTGGGTATT TCAATTAAAA CCGTTGAGAA CCAGATCGGG AAAGCCCTGC GCATTTTACG TACTGAACTG AGTGAGTATT TACCTGTTTT AATCCTGTGG CTGCTAAGTC ACCCTGAGCA ATGGCCGATC AACAACCCAT AG
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Protein sequence | MIVLQPPIIQ KPFVVLPNEQ DILSAISNGN ERAFESVFRQ YYAPLCRYAR QLVPDPDEAE EEVQAMFLTV WEKRENLNIT ISLKAYLYRA VHNRCLNRIK HISVRDEHRE HSRYLGESLV ESPMQTLLGD ELSDRLQRTI QKLPEQCRLA FTLSRFDELK YGEIADQLGI SIKTVENQIG KALRILRTEL SEYLPVLILW LLSHPEQWPI NNP
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