Gene Slin_2374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2374 
Symbol 
ID8726118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2862289 
End bp2863344 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content56% 
IMG OID 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_003387193 
Protein GI284037263 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATC AACAACCCAT AGACGACGCC CTGCTGGGCA AGTTTCTGGC GGGCGAAACC 
GATCCAGCCG AGTCGGCGCG GGTGAGGCAG TGGCTTTCTA CCCGAATCTC CGGCCCTACA
GAGCCCAGCC CCGACGATTT CGACCGATTC GAACACATCT GGAATGCGGC ACAGCCGGAC
TCCACCGAGG TCGATACTGA TGCGGCCTGG CGGTCTGTTC AGCAAAAAAT GCGCGTATCG
GATCGAAATC CAGTCAGACG GCAGGACCCG ATTAGCAAGC CGCTGCCCGT TTTACAGCCG
GAACGGCGAG TGCCTGGCAT GACGTCGTTA TGGCGTATGG CGGCCATGCT GACGCTCATA
GCGGGTATGG GCTGGCTGAT AGTCAAGCTC AGGTTTTACG GTCAGCACCA CCCGGCCGAA
GGCATGGTGG CGCTGACGGC CAATGAGCAG CCAATCAGTA AGACATTGCC CGACGGCACT
CATATTTTTC TGAATCGGCA CTCGACATTG CGGTATCCGA CGGCTTTTGC GGAGGAGCGC
CGGGATGTTA CGTTGACCGG TGAGGCATTC TTCGAGGTAA CCCCCGATGC TTCCCGACCA
TTTCATATTG CCGCCCGCCA GAGTGTCGTT CAAGTTTTGG GAACATCATT TACTGTCCGG
GCATACGATG CGAATGTGAG CGTGACCGTC CGGACTGGGA AAGTGCGGTT TTCGAGTGGT
CGAAAAGCTG TTTTACTGAC GAAAAACCAA CAAGCCACTT TTGAGGCTTC GGGCGATACC
ATGCGACGGT TACCGGCTTC ACCAAACGCG TTTGCCTATA AAACGGGTGT GCTGGTGTTC
GATAAAGAAC CGCTGCGCGA CGTCGTTCAG GCCATTAATC AGTACTATAA TGCCGATGTT
CAGCTGGCCA ATGCCAAACT CGGCAACTGC CTGCTGACAA CTCGTTTCGA TAAAATGCCG
TTGGCAACCG TTCTGAATGT GACTGCCGAA ACCCTTGGAT TACAGGTACG TTACGTGGGT
AAACAGGTGA TTTTAGAGGG AGCCGGTTGC CAGTGA
 
Protein sequence
MADQQPIDDA LLGKFLAGET DPAESARVRQ WLSTRISGPT EPSPDDFDRF EHIWNAAQPD 
STEVDTDAAW RSVQQKMRVS DRNPVRRQDP ISKPLPVLQP ERRVPGMTSL WRMAAMLTLI
AGMGWLIVKL RFYGQHHPAE GMVALTANEQ PISKTLPDGT HIFLNRHSTL RYPTAFAEER
RDVTLTGEAF FEVTPDASRP FHIAARQSVV QVLGTSFTVR AYDANVSVTV RTGKVRFSSG
RKAVLLTKNQ QATFEASGDT MRRLPASPNA FAYKTGVLVF DKEPLRDVVQ AINQYYNADV
QLANAKLGNC LLTTRFDKMP LATVLNVTAE TLGLQVRYVG KQVILEGAGC Q