Gene Slin_2372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2372 
Symbol 
ID8726116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2859391 
End bp2860356 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content51% 
IMG OID 
Productribonuclease BN 
Protein accessionYP_003387191 
Protein GI284037261 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.483691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA ACACGCTTAA ACTCTTTTTT ACCAACGCCT GGATCGTTAT CAGAGACGCC 
TTCAATGGGT TCCTGAATGA TCGGTGCCTG AAGCTTAGCG CAGCCCTGGC CTATTACACC
GTCTTTTCGC TGGCCCCCCT GTTAGTATTG ATTATTTCGG TAGTGAGTAT TTTTCTGGGC
CAGGACGCCA TTCAGGGGCA GATTTTCTCT CAGATAAATG GGCTGGTGGG CAACGAGGCC
GCCAAACAGA TTCAGGACAT GATCAAAAGT GTGAGTCTGT CCGGTAAAAC CAACACTGCC
CTGGCCATTG GCATCATTAC GCTGGTGATT GGTGCCACCA GTATTTTTGT GGAAATACAG
GATTCCGTCA ACATGATCTG GCGGGTGAAA GCGAAGCCCA AACGGGGCTG GCTGAAACTG
ATTAAAGACC GGCTCCTGTC GTCGTCACTG GTTGTCAGTC TGGGGTTTCT GCTGCTTGTG
TCGCTGATCA TAAACGGTAT TATTCTGGCC ATGAGCGACT TTCTATCCCG CTATCTGCCC
GGCATTGGCG TTTATCTGGT CAGTGGGTTT AACTTCCTGA TCAGCACCGC TGTCGTCAGT
GTTTTGTTTG CCATTATTTT CAAAGTGCTG CCCGACGCCA AGATTTCGTG GAGAGATGTG
CGGTGGGGTG CCTTTTTCAC GGCTTTGCTC TTCATGCTGG GCCGGTATCT GATTGGCCTG
TATATCGAAA CGACCAGCAC CAGCTCGGCC TACGGAGCCG CCGGTTCGCT TATCGTAATC
CTGACCTGGA TTTATTACAC AGCGGCTATT CTGTACTTCG GCGCGGAGTT CACTCAGGCC
TATGCCAACC ATTTCGGGAT AAAAATCGAA CCGGCCGACT ATGCCGTGTA TGTAGAACAG
ACTGAACGGG AACGGGATGT GGCGGTGATT CCTATCGAAA AGAAGGTAGA AGAAAGCAAA
AAATAG
 
Protein sequence
MTANTLKLFF TNAWIVIRDA FNGFLNDRCL KLSAALAYYT VFSLAPLLVL IISVVSIFLG 
QDAIQGQIFS QINGLVGNEA AKQIQDMIKS VSLSGKTNTA LAIGIITLVI GATSIFVEIQ
DSVNMIWRVK AKPKRGWLKL IKDRLLSSSL VVSLGFLLLV SLIINGIILA MSDFLSRYLP
GIGVYLVSGF NFLISTAVVS VLFAIIFKVL PDAKISWRDV RWGAFFTALL FMLGRYLIGL
YIETTSTSSA YGAAGSLIVI LTWIYYTAAI LYFGAEFTQA YANHFGIKIE PADYAVYVEQ
TERERDVAVI PIEKKVEESK K