| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2277 |
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| Symbol | |
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| ID | 8726019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 2759440 |
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| End bp | 2760258 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | |
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| Product | Integrase catalytic region |
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| Protein accession | YP_003387097 |
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| Protein GI | 284037167 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000868543 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0420034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAACT ATCGCGTTTC AGCACGTCGT GCATGCGCTG TGATTCAGTT CCGTCGATCC
TCCTTGCAGT TTAAATCTCG TCGTCGAGAT GACTCCGTGA TCCGGAAACG AATCAAAGAA
ATTGCCCAGG TAAGGGTTCG GTACGGTTAT CAGCGGATTT ATGTGCTGCT GCGCCGGGAG
GGTTGGCGTG ACAACCACAA AAGGGTGTAT AGGGTGTATT GTGAAGAAGG ATTGCATCTC
AGAAGCAAGC GCCCCCGTCG TAATCGAGCC GCTGCCCACC GGTTAGAGCG CCCCCAACTC
TCCAGTATTC ATCAGTGCTG GAGCATGGAT TTTGTGGCTG ACCAGCTTTT TGATGGCCGA
AAAATCCGGG CGTTAACTAT AGTTGATAAT TATAGTCGCC AATGCGTGGC CATTCATGTC
GGCCAATCGT TGAAAGGGGA TGATGTAGTA GCAGTGATGA ATCAACTAAA AGAGATACAT
TTGGCTATGC CCGAGCGGAT TCAAGTAGAT AATGGCAGTG AATTTATATC GAAAGCTCTC
GATTTGTGGG CTTATGACAA CGGGGTAACA TTAGACTTTT CCAGACCTGG CAAGCCAACT
GATAACCCGT TTATTGAGTC GTTCAATGGC AGTTTTCGGG ACGAGTGCTT GAACGCTCAC
TGGTTCTTGT CGTTGGAAGA TGCTCGTGAA AAAATCGAGG CTTGGCGTCA AGAATATAAT
TCCTTTCGAC CCCATAGTTC GCTCGGCGGA CGAACACCAG ATGAGGCCGG AATGGGTATT
GAAAGAAGAA CAAATGAACG TCCGGTCCTC AATCTTTGA
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| Protein sequence | MENYRVSARR ACAVIQFRRS SLQFKSRRRD DSVIRKRIKE IAQVRVRYGY QRIYVLLRRE
GWRDNHKRVY RVYCEEGLHL RSKRPRRNRA AAHRLERPQL SSIHQCWSMD FVADQLFDGR
KIRALTIVDN YSRQCVAIHV GQSLKGDDVV AVMNQLKEIH LAMPERIQVD NGSEFISKAL
DLWAYDNGVT LDFSRPGKPT DNPFIESFNG SFRDECLNAH WFLSLEDARE KIEAWRQEYN
SFRPHSSLGG RTPDEAGMGI ERRTNERPVL NL
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