| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2257 |
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| Symbol | |
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| ID | 8725998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 2734635 |
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| End bp | 2737130 |
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| Gene Length | 2496 bp |
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| Protein Length | 831 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | conserved repeat domain protein |
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| Protein accession | YP_003387077 |
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| Protein GI | 284037147 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.292182 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTGC GTATCTGTGC ATTTTTTGTT ACTATTTTTT TGTGCCTGAG TATTTTATTG
TCTCCCCTCA AGTCAATAGC TCAACTAAAA ATTACATATC CTATCAGTCG AATGGTCGTT
CAGCGCGATG CTGACAATAA GGCATCCGTA CAAATTGCCG GTAGTTACAG CCAGTCAATA
GATCTTGTTG AAGCCCGTGT CATTGCCAAA AATGCCGGTC AGGGTACTAC AACTGCCTGG
TTAACGGTAG AGGCTAACCC GAAAAATGGT CAATTCAACG GCAGTATAAA CGTTGCCGGG
GGCTGGTATA AAATTCTTGT GCGGGGGTCA AAAAACGGTA CCTCTGTCGC CGTTGACTCA
GTTGACCGAT TTGGGGTCGG TGAGGTGTTT TTGATCATGG GCCACTCCAA TGCGCAAGGA
ACAACGTGTT TTTTCGATGG GGTGAATAAA TGCCTGTCAT TAGACGGGGC CTCCGATGAA
CGGGTAAATG TGATTGGTGT TGACCAAAAC AGCGCGGCCA TGGAACAGTA CCGAAATACG
GCCGATACCC ACTACCTACC TGGCCTCGCA TTCAGTCAGT TGCTCGCCAA AAGCGGTAGT
TCGCCTTTTG CCGAAATTGC CTGGTTTTGG GGGCGTACGG GGGATGAACT CGTGCGACGG
ATTAATGTAC CTGTGCTGTT TTATAACGCA GGATTTGGGG GTACAACCAT GAAAGACAAT
TATAATGCTG CGTATGATAT TCCGTTCCAA CATTCGTTTA TTCGGTATGA CCTGCGCATG
CCCTATGTCA ATGTCCGGAA TGTCATGAAT ATGTATGTAC CCACTACGGG TATTCGGGCC
GTTCTGGTAC AACATGGCGA AAATGATCGG AGAAATCCTG AAGACTCCAC CTACAAGTAC
TACCACAAGG TTATTGAAAA GGTAAGAACG GAGTTTCTGA TGCCTAAGCT GGGTTTTATC
GTGGCTATAT CGTCGTTTGT CGATACCCGT TTCGATAATG TGAGGTCGGC TCAGTTCAGA
ATCATCGGTC AGCCGAATTT CGATACGTAT ATTGGCCCTG ATCTGGATAA TATAAACTCA
CAGGATGACC GCCCGGATGG GATTCACTTT TCTACAGCGG GTCAGGTTAA GGCAGCGGAG
TCATGGGCTA ATTCCATAAA CAATGTGCTA CGCTCGATAA CGCCTTACAC TGCCCAGCTA
CAACCCCTGG CCAGTATCAG TTGTGCCGGA GCCAATGCGC TAACGCTGAG CCAGCCGCCC
GGCTACGCTT ACGAGTGGAC AAACGGCAGC ACCTTACAAA CCATAACTGC TGGCCCCGGA
ACGTACTCCG CACGTATTAA AAGTCCGCAA TCCACAATAT TCTTTCCACC CGCCATTGTC
GTACCCCTCG CCATTCAGCC CAGCCCGCCA ACGGTAACCT CCGAAAATGG AAGCTGGGTT
ATCTGTCGTT CCACCGGTTT GACGCTGACA TCAACGGCCG GCGAGTGGAC GGAGTGGAGT
AATGGAGCTA CAGCGGCATC CATACGGGTT ACCCAACCGG GCGTATACAC CCTGAAAGCT
AAAAATCCGG TTTACGGCTG CCTGTCGGGT GGGGTGTCAC AAACTATTGG GTTGGCCAGT
GTCGATGTGG AGTTACGTAT GCAGACATCC CGTCGCGTAG TGGCGTTGAA CGATAGTGTT
CGGTTCAGCA TGTTGGTGCG CAATACGGGT GAGTGCGATG CCGCTTCCGT TACCGTAACT
AGCCGTCTTC CATCACCCGT TACCGTTGTT TCGTTAGGTC CGGCTGTGAC ATTTGACAAC
AAAGCCGTAA GTACAACTAT ACCGGCAATA CTGTCGGGAC AAACAATAAC ACGCCAGTAT
GTGGCTCGGG TCACTGCCTC CGGCTACTAC CAGATTTCGT CCGAAATAAC GGCTATGGCC
AATAAAAATG CCAAAGCGAT TCCGAACGAT GGCTCGGCAA ATGGTGAAAT GGATGAGGCC
CTTGTCGATT TAAGGACGAT AGCAAATTCG TCGGCTGTGT ATACGTCTCC CAATCCAGCG
CAGGTCCCGA TAGCACCAGT AATCAGCAAT CAACCCGCGC CTGACCCCGG TAAAGCCGAT
TTGAGTCTGC AAATCAGATT GAACCAGCTT GTTGCTGCGG TTGGTCAGCC GATTGAAATT
AGCCTGATGG TTCATAATCA GGGGGGAGCA GAAGCGACGA ATACGGTGGT AGGTAGTCCG
TTGCCCTCTA ATATTCAGTT TATCTCCTCC GTTTCGGGAA TGGGCGTTTC CAGTGGAGTT
GTCAGTGGTA AGATCAGTAA AATAGCTGTG GGAGAGTCGA CCACGCTGAA GTTTTTGGTT
AAAACGCTCA AGACCGGCAC CTTCACGAAC CAGGCCCAGA TTGTCAGTAC GGATCAGGCT
GATTCTGATT CAACCCCGGG TAATGGGTAT GCTAATGGTG AAGACGATCA GGCCAGCGTA
CTTTTTCGGA CAATCAACCC GGTGACGGCT AATTAG
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| Protein sequence | MDLRICAFFV TIFLCLSILL SPLKSIAQLK ITYPISRMVV QRDADNKASV QIAGSYSQSI
DLVEARVIAK NAGQGTTTAW LTVEANPKNG QFNGSINVAG GWYKILVRGS KNGTSVAVDS
VDRFGVGEVF LIMGHSNAQG TTCFFDGVNK CLSLDGASDE RVNVIGVDQN SAAMEQYRNT
ADTHYLPGLA FSQLLAKSGS SPFAEIAWFW GRTGDELVRR INVPVLFYNA GFGGTTMKDN
YNAAYDIPFQ HSFIRYDLRM PYVNVRNVMN MYVPTTGIRA VLVQHGENDR RNPEDSTYKY
YHKVIEKVRT EFLMPKLGFI VAISSFVDTR FDNVRSAQFR IIGQPNFDTY IGPDLDNINS
QDDRPDGIHF STAGQVKAAE SWANSINNVL RSITPYTAQL QPLASISCAG ANALTLSQPP
GYAYEWTNGS TLQTITAGPG TYSARIKSPQ STIFFPPAIV VPLAIQPSPP TVTSENGSWV
ICRSTGLTLT STAGEWTEWS NGATAASIRV TQPGVYTLKA KNPVYGCLSG GVSQTIGLAS
VDVELRMQTS RRVVALNDSV RFSMLVRNTG ECDAASVTVT SRLPSPVTVV SLGPAVTFDN
KAVSTTIPAI LSGQTITRQY VARVTASGYY QISSEITAMA NKNAKAIPND GSANGEMDEA
LVDLRTIANS SAVYTSPNPA QVPIAPVISN QPAPDPGKAD LSLQIRLNQL VAAVGQPIEI
SLMVHNQGGA EATNTVVGSP LPSNIQFISS VSGMGVSSGV VSGKISKIAV GESTTLKFLV
KTLKTGTFTN QAQIVSTDQA DSDSTPGNGY ANGEDDQASV LFRTINPVTA N
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