Gene Slin_2241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2241 
Symbol 
ID8725981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2711785 
End bp2712879 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content53% 
IMG OID 
Productsignal transduction histidine kinase, LytS 
Protein accessionYP_003387061 
Protein GI284037131 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACC GGTTCTCCCA GATCGCGATT CACTTGTTGG GTTGCCTTAC GTTTCTGGCC 
CTGCCCTACG TCTTTGCCGA CGATGGATTT GCCCGGTTGG CCGAGCTCCC TTACAATCCG
CACGAACAGC GCACGCAGGT GTCGTATCTG TTAACCATTG GGTTCTTTTA CGTCAATTAT
TATGTACTGA TTCCGAGGCT CTATTTCGCC AGACGCTATG TTCTGTATGC GGTTGCGTCG
GTAGGCTGTT TTTTACTGAT TGAGAGTACA CTGGCCGCTA TCAACCGGCG AGCGTATCGT
CCACCCGTCA GGCCCTCCTT TTCGGCCCCA CCCCCCAATG CCGCTTACCG GCACGAGGGG
ATTCAGGGAA CCTATCCTCC GTCACTGCCG CCCCCTGGAC AACGCCAGCC CGGCCTTCCT
TCCGAATTGG CGCAAACCTT TTTTCTGACG CTGGCCGGAT TTCTGATGGC GCTGGCCCTG
CGCGTCAACA GCCGCTGGCG GGAAACGGAA CAGGAGAAAA TACAGACCGA ACTGTCGTAC
CTCAAAGCCC AGATAAACCC TCATTTTCTG TTCAATACCC TGAACAGCAT CTATTCACTG
GCCATTATCG AGTCGCCCCA AACGGCAGCC GCCCTTGTTG AACTGTCGTC GTTTCTGCGG
TACGTTATTC AGGAATCGCA GAAGAACCGG GTTTCCGTGC ATAACGAACT CGATTACATC
CGTCAGTATA TCGCCCTGCA ACGACTACGA CTGGGCGATA CGGCCCAAAT CGAGTTTACC
GTTGAAGGCA GCCCCGGTAG TCAGCAGATT GCTCCCCTCC TCCTGATTTC ATTCATTGAA
AATGCCTTTA AGTACGGCGT CAGCCCGGAG GAGCCCTCTA CCATTCGGAT TGGCATCCGG
CTCGAAGAGC AAGCAATTCA TTGCCATGTT TTCAACAAAA AGGTTCGGAT TTTTCAGCCA
ACGGCCGTAG CGAGCGGTAT CGGGCTGACC AACACCAAAG CCCGGTTGCA GCTTTTATAT
CCAACGCATC ACCAACTGCG CATCAACGAC CTGGCAGATC GCTTTACCGT TGATTTATCT
ATTACACTGT CATGA
 
Protein sequence
MNNRFSQIAI HLLGCLTFLA LPYVFADDGF ARLAELPYNP HEQRTQVSYL LTIGFFYVNY 
YVLIPRLYFA RRYVLYAVAS VGCFLLIEST LAAINRRAYR PPVRPSFSAP PPNAAYRHEG
IQGTYPPSLP PPGQRQPGLP SELAQTFFLT LAGFLMALAL RVNSRWRETE QEKIQTELSY
LKAQINPHFL FNTLNSIYSL AIIESPQTAA ALVELSSFLR YVIQESQKNR VSVHNELDYI
RQYIALQRLR LGDTAQIEFT VEGSPGSQQI APLLLISFIE NAFKYGVSPE EPSTIRIGIR
LEEQAIHCHV FNKKVRIFQP TAVASGIGLT NTKARLQLLY PTHHQLRIND LADRFTVDLS
ITLS