Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2208 |
Symbol | |
ID | 8725946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2677247 |
End bp | 2678569 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | amidohydrolase |
Protein accession | YP_003387029 |
Protein GI | 284037099 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00166067 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGCCATA TCTTGATTAT CCTCTTGGTG TTGACCTCCG TTTCTCTATT GGCCCAACCC GCCCAAAAAT GGTTGATCAC AGTCGGTAAG CTCTATGATG CTGAGCAGAA AACGTTTCGG ACGAATCAAC AGATTCTGGT CGTCAACGGC ATCATCCAAG CGGTTGGACC AAACCTGATT AAGCCCGTAA ATACCAAGGT AATTAATCTG GGCCAATGCA CAGCCACACC CGGTCTTATG GATATGCATA CGCATCTGTT GCTCCACCAA AAGCAACGGA AAGATGGACT AGAAATGGCT TCGAAGGTGC CACCCAATGA ACGCATTCAA CAAGGACTAG TGTTCGCTAA ACTCAACTTA GAAGCCGGTA TTACCACGGT TCGTGACTTG GGAAACTCGG GACAATACTT AGATCTACAG TTGCAGAAGA AGCTAACCGA TGAGCGCACA GTCGGTCCTA CCATGTATGT CTCGGGCCCA ATCATCAGCC CCCCTGGTGG GCAATTTTAC AAACCTGCTC CTGCAGACAG TTTTTTAATC GACCAAGAAT ACCGGGTGGT GAAAGGGGCC CTCGATGCGA AAGCGGCTGT AGAAGAACAC ATTCAAAGGG GGGTCAACCT CATCAAGGTC TGCATGAACA ACGACAAGCG CGTACTAGCC CCGGAGGAGA TTAAAGCCAT TGTCGAAAGG GCACATCAAC AGGGTCTTTC GGTCACCGCT CATGCTACCT TTGATGAGTC GGCAAGAGAC GCCGTTTTAG CGGGCGTAGA TGGCATTGAA CATGGCTATA GCTTATCGGA CAGTACCTTA CAGCTAATGG CCCAGCGGGG CACTTATTTA GTGCCTACGG ATGTATCAAA GCAAACAGCT GATATAAAAG TGGCTGGAAT TGGCATGGTC GGTAAAGAAG CAGAGGACTA TGCCAATAAC TTTCTTAAGG CAATACACGA TAGATTACGT CGAGCTGTGG CGAAGGGCGT TACGATTGTA GCCGGTTCGG ATTACTATGG TGATATTGCT TTACTAGAAC GTGGCAAAGG GGCGGTTGAT GTACTGCTAG CCTACCACGA AGCGGGTATT CCTGTGGTTG ATGTACTGCG CTATGCAACC TACAATGCGG CCAAAGCCCA AGGTATAACT GACAAGGTAG GCCTCATCAA GGCAGGCATG AAAGCAGATA TCGTGTTTTT CAGCGGGGAC TTAGAGCATA ATTTTGCTCA ATCGCTGTTC AGCGTCAAGC TAATCATGAA AGAAGGCCGT TTAGTTTATC CACCTGCTGA GAGTTCGGCT GGCCGAAAGA CTCTTACTCC AGGTTCAAGG TGA
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Protein sequence | MRHILIILLV LTSVSLLAQP AQKWLITVGK LYDAEQKTFR TNQQILVVNG IIQAVGPNLI KPVNTKVINL GQCTATPGLM DMHTHLLLHQ KQRKDGLEMA SKVPPNERIQ QGLVFAKLNL EAGITTVRDL GNSGQYLDLQ LQKKLTDERT VGPTMYVSGP IISPPGGQFY KPAPADSFLI DQEYRVVKGA LDAKAAVEEH IQRGVNLIKV CMNNDKRVLA PEEIKAIVER AHQQGLSVTA HATFDESARD AVLAGVDGIE HGYSLSDSTL QLMAQRGTYL VPTDVSKQTA DIKVAGIGMV GKEAEDYANN FLKAIHDRLR RAVAKGVTIV AGSDYYGDIA LLERGKGAVD VLLAYHEAGI PVVDVLRYAT YNAAKAQGIT DKVGLIKAGM KADIVFFSGD LEHNFAQSLF SVKLIMKEGR LVYPPAESSA GRKTLTPGSR
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