Gene Slin_2208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2208 
Symbol 
ID8725946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2677247 
End bp2678569 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content49% 
IMG OID 
Productamidohydrolase 
Protein accessionYP_003387029 
Protein GI284037099 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00166067 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGCCATA TCTTGATTAT CCTCTTGGTG TTGACCTCCG TTTCTCTATT GGCCCAACCC 
GCCCAAAAAT GGTTGATCAC AGTCGGTAAG CTCTATGATG CTGAGCAGAA AACGTTTCGG
ACGAATCAAC AGATTCTGGT CGTCAACGGC ATCATCCAAG CGGTTGGACC AAACCTGATT
AAGCCCGTAA ATACCAAGGT AATTAATCTG GGCCAATGCA CAGCCACACC CGGTCTTATG
GATATGCATA CGCATCTGTT GCTCCACCAA AAGCAACGGA AAGATGGACT AGAAATGGCT
TCGAAGGTGC CACCCAATGA ACGCATTCAA CAAGGACTAG TGTTCGCTAA ACTCAACTTA
GAAGCCGGTA TTACCACGGT TCGTGACTTG GGAAACTCGG GACAATACTT AGATCTACAG
TTGCAGAAGA AGCTAACCGA TGAGCGCACA GTCGGTCCTA CCATGTATGT CTCGGGCCCA
ATCATCAGCC CCCCTGGTGG GCAATTTTAC AAACCTGCTC CTGCAGACAG TTTTTTAATC
GACCAAGAAT ACCGGGTGGT GAAAGGGGCC CTCGATGCGA AAGCGGCTGT AGAAGAACAC
ATTCAAAGGG GGGTCAACCT CATCAAGGTC TGCATGAACA ACGACAAGCG CGTACTAGCC
CCGGAGGAGA TTAAAGCCAT TGTCGAAAGG GCACATCAAC AGGGTCTTTC GGTCACCGCT
CATGCTACCT TTGATGAGTC GGCAAGAGAC GCCGTTTTAG CGGGCGTAGA TGGCATTGAA
CATGGCTATA GCTTATCGGA CAGTACCTTA CAGCTAATGG CCCAGCGGGG CACTTATTTA
GTGCCTACGG ATGTATCAAA GCAAACAGCT GATATAAAAG TGGCTGGAAT TGGCATGGTC
GGTAAAGAAG CAGAGGACTA TGCCAATAAC TTTCTTAAGG CAATACACGA TAGATTACGT
CGAGCTGTGG CGAAGGGCGT TACGATTGTA GCCGGTTCGG ATTACTATGG TGATATTGCT
TTACTAGAAC GTGGCAAAGG GGCGGTTGAT GTACTGCTAG CCTACCACGA AGCGGGTATT
CCTGTGGTTG ATGTACTGCG CTATGCAACC TACAATGCGG CCAAAGCCCA AGGTATAACT
GACAAGGTAG GCCTCATCAA GGCAGGCATG AAAGCAGATA TCGTGTTTTT CAGCGGGGAC
TTAGAGCATA ATTTTGCTCA ATCGCTGTTC AGCGTCAAGC TAATCATGAA AGAAGGCCGT
TTAGTTTATC CACCTGCTGA GAGTTCGGCT GGCCGAAAGA CTCTTACTCC AGGTTCAAGG
TGA
 
Protein sequence
MRHILIILLV LTSVSLLAQP AQKWLITVGK LYDAEQKTFR TNQQILVVNG IIQAVGPNLI 
KPVNTKVINL GQCTATPGLM DMHTHLLLHQ KQRKDGLEMA SKVPPNERIQ QGLVFAKLNL
EAGITTVRDL GNSGQYLDLQ LQKKLTDERT VGPTMYVSGP IISPPGGQFY KPAPADSFLI
DQEYRVVKGA LDAKAAVEEH IQRGVNLIKV CMNNDKRVLA PEEIKAIVER AHQQGLSVTA
HATFDESARD AVLAGVDGIE HGYSLSDSTL QLMAQRGTYL VPTDVSKQTA DIKVAGIGMV
GKEAEDYANN FLKAIHDRLR RAVAKGVTIV AGSDYYGDIA LLERGKGAVD VLLAYHEAGI
PVVDVLRYAT YNAAKAQGIT DKVGLIKAGM KADIVFFSGD LEHNFAQSLF SVKLIMKEGR
LVYPPAESSA GRKTLTPGSR