Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2195 |
Symbol | |
ID | 8725933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2660741 |
End bp | 2661310 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | Cupin 2 conserved barrel domain protein |
Protein accession | YP_003387016 |
Protein GI | 284037086 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.192313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00112961 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATTGACA CAATGAAAAC TAACCAAACG ATCATGGAAA TTTCCATCCA CAACAGGACA ACTTACGTTT CAAAACATCC GATACCCTCT GCGCTAATGG TCAGCCTGGT CCGCCGTAGT CTCCTGCTGC TGATTTTCCT GATTACCTGT ATACATATAG CTTTGGGGCA GCGTTTTAAC GTCGTTACGG GTCCGCAGGC AGCCACACGT GGCCCCGCTG ATACGTTCAC GGGGACCGTT TGGGTGACAA GCCTTGTCCC CAACGACTCG ATCTTTACGA CCATTTCCGG CAGTGTCGCT TTCGAGAAGG GTGCCCGCTC GCACTGGCAT TCTCATCCGG CCGGGCAGAT CCTCATTGTT ACGGATGGGA TCGGTTATCA TCAGATCAAA GGGGAACCCA GGCAAGTGAT TCGGAAAGGC GACGTAGTGA AATGCCCGCC TAATGTGGTT CATTGGCACG GAGCAAGTCT CGACAGTAAA ATGACTCACT TGTACATAAT CCCAAACACC GAAAAAGGTA TTGTTAAGTG GCTGAAGGCC GTCACGGATG CGGAGTACGG TCAGAAATAA
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Protein sequence | MIDTMKTNQT IMEISIHNRT TYVSKHPIPS ALMVSLVRRS LLLLIFLITC IHIALGQRFN VVTGPQAATR GPADTFTGTV WVTSLVPNDS IFTTISGSVA FEKGARSHWH SHPAGQILIV TDGIGYHQIK GEPRQVIRKG DVVKCPPNVV HWHGASLDSK MTHLYIIPNT EKGIVKWLKA VTDAEYGQK
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