Gene Slin_2147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2147 
Symbol 
ID8725885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2604168 
End bp2605160 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content41% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386974 
Protein GI284037044 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.571318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.351131 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGTTA TGGAACAAAA CCCTTTTCTA TTTGGCATTT ACCTCGGTGG GGTAGCCGGA 
ATAGACAACG AAGTTGGGTT AACGGTCAGC AAAGCTGATA AACCCGGTGC TATCTGTCAG
GCTTTAGATA CCCTTCAAGG AGAAAAGAAT TTATTTATTG TCCGCAATTA TCTCCACTTC
AAGGGTGTCC CTCAAATTGA TTCAGTCAAT GAGGCCGTGC AAAACGCTCA TCAGTATTGT
GGGCCAAACC GAAAACTTGA TTTAGTACTG TGCTTTCAGA CAACCGTTTA CTCCTCCTCT
ATATGGCAGC AATTTATTCA TCAAGTACTC GATTACTATG GACCTGTTTT ACATTCTATA
CAGATTGCCG AAGAGCCTAA TATGTATCAG TTTCCGGGTG ATGGGACATT TCCTCAAATT
AGTCAAGTTA TTGTTGATGG GGTCATCTTC GCCAAGCAAG AGATTCGCAA AAGAGGTTTA
CCTATACAAG TGGGTTTTAA TGCAGTGCCC TGTTTTGATA AGGCCGATCC CTTTTGGAAT
AGCTTACGCC AGTTACTAGA CGCTAGTTTT CTTGATTCAC TAGATTATGT TGGGCTCGAC
TTTTTTCCGG ATGTGTTTAG ACCCATCAAT CCAGATAGTC AGGAAGGTGA TATTCATAAA
ATGGTCGAGG GGCTACTCCA TCATTTTCGG GACGTAAATC TAAAAACTAC CGGTATTGAT
CAAACCATTT CTATTCGTAT TACAGAACAT GGTTGGCCTA CAGGTCCTAC TCGAAGTCCT
GAACGCCAAG CCTACTTATT GAATACGATA ATTCGTGGTA TTTACGCTTG TCGAACGGAA
CTCAATATCA CTCATTATGA GCTTTTCTCG TTGCGTGATG CCGATAGTGA GAACCCTAAC
TTATTTTATC AGTTTGGCCT ACTTCAAGAT GACTACTCGG CAAAACCTGC CTTTTATACC
TATCAACAAT TAATTGAAGA ATTATCTTCA TAA
 
Protein sequence
MRVMEQNPFL FGIYLGGVAG IDNEVGLTVS KADKPGAICQ ALDTLQGEKN LFIVRNYLHF 
KGVPQIDSVN EAVQNAHQYC GPNRKLDLVL CFQTTVYSSS IWQQFIHQVL DYYGPVLHSI
QIAEEPNMYQ FPGDGTFPQI SQVIVDGVIF AKQEIRKRGL PIQVGFNAVP CFDKADPFWN
SLRQLLDASF LDSLDYVGLD FFPDVFRPIN PDSQEGDIHK MVEGLLHHFR DVNLKTTGID
QTISIRITEH GWPTGPTRSP ERQAYLLNTI IRGIYACRTE LNITHYELFS LRDADSENPN
LFYQFGLLQD DYSAKPAFYT YQQLIEELSS