Gene Slin_2146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2146 
Symbol 
ID8725884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2603421 
End bp2604056 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content46% 
IMG OID 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003386973 
Protein GI284037043 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.756264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.322548 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGA TAGTTGAGTT AGTCACTGCC TGGGCGGAGT TCGATCAGCA ATATCCGAAT 
CAATCCGTTG AGCAATTTTG CCAATACCAG TTAGCTCAAC AAAAGGCAAC CGAGGCAGAA
TCGAATTATG ACCGTCAGCA ACAGATTGGT GGGCTGCTAA AAATCTTAGG TCGGATAACG
AGTGCTTTTG CGTTGTATCA TCGGGCGGCT ATGGCTAAAA CCGGTCTGCC AACGGCCGAA
AGCTTTTACT ATTTAAATGG CCTACGGTAT CTAGGGGAAG TACGAAAGAC CGAATTAATC
CAGTACCTTT TTGCTGAATA CACGACTGGT ATGGAGGCAA TCAGTCGCTT ACACGAAGAG
GATTACATTG TAGAACGTGC TGATCCAGCC GATAAACGAG CGAAGCTAAT CAGCTTAACC
GAAAAAGGGA TCCAGGCCTT ATCAGCCAGC TATCAGTACA GTTCAAAGGC GGGCGAAATG
ATCTTTAATG GTGTTAATAC CGAAATCATC AACCTCTGCC AAGCCTTGTT GGCTCCCATT
GAAGAACGGA ACACCCAGGA GGTGGCTAGT CTAAAGACAA AAGATTTTGA TGTGATGTAT
GCTCGGCTGA TGAAGGAGAG TACGAATCAA CCTTGA
 
Protein sequence
MSKIVELVTA WAEFDQQYPN QSVEQFCQYQ LAQQKATEAE SNYDRQQQIG GLLKILGRIT 
SAFALYHRAA MAKTGLPTAE SFYYLNGLRY LGEVRKTELI QYLFAEYTTG MEAISRLHEE
DYIVERADPA DKRAKLISLT EKGIQALSAS YQYSSKAGEM IFNGVNTEII NLCQALLAPI
EERNTQEVAS LKTKDFDVMY ARLMKESTNQ P