Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2129 |
Symbol | |
ID | 8725867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2581952 |
End bp | 2583169 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | |
Product | peptidase C10 streptopain |
Protein accession | YP_003386959 |
Protein GI | 284037029 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0701218 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGTAA ATTATTTTAC ACTTACACGT CTGTTGTCAT TCTTAATTAT ATTCGGAGTG GCATCTTGTC AGAAATCGGG CTTATTAGAG CCTTCAGACC CTCAGATAAA TTCGAATATA GTTTCGATTG AACAAGCTAA TAAAGTTGCT AGCACAGCTC CACAAATAGT TAATCCTAAA AACGCGAATA GTCAAGCACG GATTGGATCA TCTAAAAAAA CCCAAGAAAC GTTCACCAAA TATGATGAAT ATAAGAATCC ACTACTTTAC ATTATTACCT ATAAAGAAGG AGGGTTTATC ATAGTTTCTG GAGACAACCG TATCACACCG GTTTTAGCTT ATTCCGATAA TAATTCTTTT ATCAACAAAA CCGACAATAT GCCTTCAGGG CTCAAAGATT GGTTTTCTAG TGTTGAACAA GTCATTAAGA GAATTCGTAA GGATAATCAG GAGCAAGATA AAACCGTTAA ACGAGTATGG GATAAATTTA TACAACAATC TGCTAATGGT CGGCTAATAA CAGTGGAAGG CGATTGTAAT ACCGATCCTT CCATGAAAGT GTATTTTGAG TTTGGCCCAT TTGTGACTAC CACATGGGAT CAAGCTGATG GATATAATGA TGCACTCAGT TATTCGAGTT GCACGACAAC TGCTAATGGG AAAGTATTAA CTGGTTGTGT AGCAACTGCA GTAGCCCAAA TTATGAAGTA CCACGCATAT CCTACAAGTT ATAGCTGGTC AAGCATGCCT AATAATTATG GAACTAACGC CACTGCAGTC TTAATGCGCG ATTTGGGTAC CTCAGCCAAT CTAAATGCAA GTTATGGATG TAACAGTACT TCTGCCCCCA TGTCCAATAT CCCGACGACT TTTAGTCACT TTGGCTATTC TACACCCTCA CTTTCAAGTT ATAATTATTT TACAGTAAAG TATGAACTCC AAAATTATAG TAGACCTGTC ATTCTTAAAG GTCAGAGTAA TTCAGATGCC CATGCTTGGG TCTGTGATGG TGTAAGGCAC TGGGACTATT ATTCTTGCCA GCCAGACCCA AATACACCCG GGGAAAAGAT CGCAGTATAT ACAGGCTACG ATGCTGGCCT ACATATGAAT TGGGGGTGGG GTAATAGTTA TAATGGCTGG TATAGTGCTA ACAACTTCAA TCCAAGTGGC TACGCTTTCA ATTCATATAG AGAAATGGTA ACGGGAATAA CTCATTAA
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Protein sequence | MNVNYFTLTR LLSFLIIFGV ASCQKSGLLE PSDPQINSNI VSIEQANKVA STAPQIVNPK NANSQARIGS SKKTQETFTK YDEYKNPLLY IITYKEGGFI IVSGDNRITP VLAYSDNNSF INKTDNMPSG LKDWFSSVEQ VIKRIRKDNQ EQDKTVKRVW DKFIQQSANG RLITVEGDCN TDPSMKVYFE FGPFVTTTWD QADGYNDALS YSSCTTTANG KVLTGCVATA VAQIMKYHAY PTSYSWSSMP NNYGTNATAV LMRDLGTSAN LNASYGCNST SAPMSNIPTT FSHFGYSTPS LSSYNYFTVK YELQNYSRPV ILKGQSNSDA HAWVCDGVRH WDYYSCQPDP NTPGEKIAVY TGYDAGLHMN WGWGNSYNGW YSANNFNPSG YAFNSYREMV TGITH
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