Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2048 |
Symbol | |
ID | 8725786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2477882 |
End bp | 2479501 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | General substrate transporter |
Protein accession | YP_003386892 |
Protein GI | 284036962 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.617643 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.599548 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCCA AACCTCAATA CCTAACTGAA AAAATGATAG TAGAACAAAC CCCCAAATCT GAAGCCGGTA CCAAAACGTT ACTGAGCGTA ATTGGTGCCT CTTCGCTGGG AACCCTCATT GAATGGTACG ATTTTTACAT CTTTGGCAGT CTGGCCGCTA TTCTGTCCAC ACAATTTTTT CCAAAAGATA ACCCAACGGC CGCCTTGCTG TCTACGCTGG CAACGTTTGC CGCCGGTTTC ATTGTCCGTC CGTTTGGAGC GTTGGTATTT GGTCGGTTAG GCGACCTCGT TGGCCGGAAA TATACGTTTC TGGTGACGCT GGTGCTGATG GGTGGATCAA CATTTTTTAT CGGGCTGATT CCGGGTTATG AGACTATCGG TTTCTGGGCA CCGTTGCTTG TGCTGCTGCT TCGCCTGATA CAGGGGCTGG CGCTGGGAGG TGAATACGGC GGAGCAGCTA CGTACGTAGC CGAATATGCT CCTAAAGGTC GTAGGGGTTA TTATACCAGC TTTATTCAGA CAACGGCAAC CTTAGGACTG TTCGTGTCGC TGGGCGTGAT TGTGGCAACC CGGCAGGTGG TGGGCGTGGA GGATTTTGCC AAGTGGGGCT GGCGTATCCC CTTTGTCTTG TCCGCTTTAC TGGTAGGCGT TTCTATTTAT ATACGCTTGA AAATGTCGGA GTCGCCGGTG TTTACCAAGC TTAAATCGGA AGGGAAAACA TCCAAGAACC CACTAGCCGA GAGCTTTGGC AAGCGCGAAA ACCTGAAAAT GGTCTTACTG GCCTTGTTTG GGGCTACTAT GGGGCAGGGT GTTATCTGGT ACACAGGTCA GTTTTATGCC CTGTCGTTTA TACAGAAAGC CTGTAATGTC GAATTTGTCC AATCTAACAT TGTCGTGGCG GTGGCCCTGC TGATTGCCAC CCCCTTCTTC GTAATATTTG GTGGTCTGTC GGACAAAATA GGCCGTAAAG GCATCATGCT GGCCGGTATG GCGCTGGGCA TTCTGACCTA TCGCCCAATT TACGAGAAGA TGTATAGCCT GACGGATTTG AAGGCGAAAC AGGAACTGAC CGAACAGACG AAAGTAGACG TTAAAAAAGC GTTGGTTGCG AACACCGCCG ATTCACTGAT CACCACAACG ACGACCAAAG CCTTCGCCGA TGGTACCGCT TACAAGGAAG TGTCGAAACA GACCGTTCCG GCCGATGCGT CGGTGGAGAA GCCCAAACCC GAGGTAGTTA AATCGGTGAC GATGTCGACG GGTGATTTAA TGATGATGAT TTTTCTGGTG CTGCTTCAGG TGTTGTATGT AACGATGGTA TACGGCCCGA TAGCCGCCTT TCTGGTTGAG TTGTTTCCAA CCCGGATTCG TTACACATCC ATGTCGTTAC CCTACCATAT TGGCAACGGT GTTTTTGGCG GGTTGGTACC GTTTATTGCA ACGGCGCTGG TAGCAACGGC TACGAAGGCG AATGAAACTG CGGCAGCGGC CGGTGTGGCT CCCGTTGTTT CCAAAGCCTA TCTGGAAGGG CTCTGGTACC CGATTATTGT GGCCAGTGTG TCCTTTATAA TTGGGTTGTT ATATCTGAGT AACCGCGCTA AAGCCGTCGA GCGCGACTAG
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Protein sequence | MNSKPQYLTE KMIVEQTPKS EAGTKTLLSV IGASSLGTLI EWYDFYIFGS LAAILSTQFF PKDNPTAALL STLATFAAGF IVRPFGALVF GRLGDLVGRK YTFLVTLVLM GGSTFFIGLI PGYETIGFWA PLLVLLLRLI QGLALGGEYG GAATYVAEYA PKGRRGYYTS FIQTTATLGL FVSLGVIVAT RQVVGVEDFA KWGWRIPFVL SALLVGVSIY IRLKMSESPV FTKLKSEGKT SKNPLAESFG KRENLKMVLL ALFGATMGQG VIWYTGQFYA LSFIQKACNV EFVQSNIVVA VALLIATPFF VIFGGLSDKI GRKGIMLAGM ALGILTYRPI YEKMYSLTDL KAKQELTEQT KVDVKKALVA NTADSLITTT TTKAFADGTA YKEVSKQTVP ADASVEKPKP EVVKSVTMST GDLMMMIFLV LLQVLYVTMV YGPIAAFLVE LFPTRIRYTS MSLPYHIGNG VFGGLVPFIA TALVATATKA NETAAAAGVA PVVSKAYLEG LWYPIIVASV SFIIGLLYLS NRAKAVERD
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