| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1995 |
|---|
| Symbol | |
|---|
| ID | 8725733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 2408767 |
|---|
| End bp | 2409711 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003386839 |
|---|
| Protein GI | 284036909 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0136367 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0207277 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGTA TTACCTTTGA GAATGAGGAT GAGATCCGGG TAAAGTCCCT GGCTGGTGCT
ATTATCATCA ACGTGATTTT AGTCGCCCTG CTATTGCTGG TCAACTTATC CCAGACTGTT
CCCAATCCGC CCCCCATTGA GTTTGTAGAG GTTAATTTTG GTACCGACGC CCGTGGCAGT
GGACGTATTC AAACCTACAA TAAAGCGTCA GACTCCCCTA ATCCGGTGGA TGTTAAGGCC
GCTGATAAAC GACCAAATCC AAAGGTAAAC ACTACGCCCC GAGTAGAAAA GACCCGCGTT
ACCCCGTCAC CAAAGGTGGA GGATGTAAAA CCGGCCAAAA CCGCTACGGA GAAACCAATT
ATTGCCAGTA AATCGGAGAG TCCCGTTACG ACGCCCGAGC GCCCTGAACC CAAGCGGGTT
GAATCCGCTA AGCCAACGGC TCCGGTAGAG CGTCCAGCTC CTCCGGCCCC GCCCAAAAAG
GTGGAGACGG TCAATAACGA CGCCCTGTTC AAGAAATCAT CCGGTGGAGG AGGTTCCAAT
GGAACGGTTG GGAAAGCCTC CGGAACAGGT GGTAACAATA ATGGTGACGA CGCCAGTGGG
GTAGGTGATA AAGGCAACCC TAATGGGAAG ATCGATGCCA AAGCACTCTA TGGTACTCCG
GGGGGGAGCT CTTCCGGTGT GAATTTTGAT GTCTCGGGTT GGTCTTTGGC CAGCCGTCCC
AGCATCAGTG ATGATTCGGA TGAAACGGGG AAGATCGTTT TTAAGATAAC CGTAGATGGG
GAAGGTGAAA TAATCCGGGT TCAAACCCAG CAGACAACGG TTAGCCCGTC GGTAGTAGAA
GTGTATCGGA AAGCGGTGCA ACGACTGCGT TTGCGGCCAA AAGGGGGCGC AACACCACCA
ACCGCAAGCG GTACCATAAC ATTTATCATT AAGTCAAAAG ATTAA
|
|---|
| Protein sequence | MNRITFENED EIRVKSLAGA IIINVILVAL LLLVNLSQTV PNPPPIEFVE VNFGTDARGS
GRIQTYNKAS DSPNPVDVKA ADKRPNPKVN TTPRVEKTRV TPSPKVEDVK PAKTATEKPI
IASKSESPVT TPERPEPKRV ESAKPTAPVE RPAPPAPPKK VETVNNDALF KKSSGGGGSN
GTVGKASGTG GNNNGDDASG VGDKGNPNGK IDAKALYGTP GGSSSGVNFD VSGWSLASRP
SISDDSDETG KIVFKITVDG EGEIIRVQTQ QTTVSPSVVE VYRKAVQRLR LRPKGGATPP
TASGTITFII KSKD
|
|---|
| |