Gene Slin_1930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1930 
Symbol 
ID8725667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2336398 
End bp2337087 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content47% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386774 
Protein GI284036844 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACT TCTTTCTACT ACTAACTTTT GCCGGAGCTG TCGGTTCGGC CCATGCTCAG 
GAATTGGTCA ATGTTGCCGC TACAAAAACG TCAGTAGGGC GTTGGGCCGT AGCCATTGAA
ACGGATAATC TATTGCTTCT ACAAAAAGTT GACGGTCCGG GAGATGACTA CTATTTACGA
AAGATAGTGC CTGGTATTGG CTATTTTGCT ACCAACACTC TTTTGCTTGG CGTTGGAGTT
CCTCTTGGCT TATCTCCCCG AAACGGAACC TACTACAGCA GTGGAATAAA TGGCCAGGCC
GGGGTCTATT CTTCCACTAT TTCGCCTACA CAGATTGGAA TCGCCCCGTT TGTGCAACAG
TTTCTGGGAA AGGGGAAAGT CAAGCCGTAT GTGGGGGCTT CTTACCGATA CACCCACCAA
CAACTTAACT TTAGTATTCG CGAACTGTCG GTTTATCTGA AGCAAACCGG AAACGAATCT
GAACTGTCTG TCTTTACCGG CTTGACCTAC TTAATTACGC CTAAGTTGGG GATTGATGTT
AAACTTCGCT ACGGTTGGCA GTGGGGAAAT CATCCGTACA TGACTTTTCC GAACCGCCTG
GAATCGAGCT ATTCCTCAAC CTACTCCTAT ATGGGTCAAC TCGCATCCGC TAATGTGGGC
TTGCGTTTAA TGATCGGTGA AAAATACTGA
 
Protein sequence
MKNFFLLLTF AGAVGSAHAQ ELVNVAATKT SVGRWAVAIE TDNLLLLQKV DGPGDDYYLR 
KIVPGIGYFA TNTLLLGVGV PLGLSPRNGT YYSSGINGQA GVYSSTISPT QIGIAPFVQQ
FLGKGKVKPY VGASYRYTHQ QLNFSIRELS VYLKQTGNES ELSVFTGLTY LITPKLGIDV
KLRYGWQWGN HPYMTFPNRL ESSYSSTYSY MGQLASANVG LRLMIGEKY