| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1881 |
|---|
| Symbol | |
|---|
| ID | 8725618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 2275479 |
|---|
| End bp | 2276786 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | PAS/PAC sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_003386725 |
|---|
| Protein GI | 284036795 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.652277 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGGG CCAAACCATA TGAACAGTTG CTGGCTGAAA ATGAAAATCT ACGCTGGCAA
CTTTACGAAG CAACCGAAAC AATTCAGGCC ATCCGAACCG GTCAGATTGA CGCACTTGTT
GTTCAGGGAA CGGAAGGGCA CGAACTCTAT ACACTTAAAA CGGCAGACCA TACATACCGG
ATCTTCATCG AAACCATGAA TGAAGGGGCC GTAACCCTAA ACCGGGAAGG GTTTATCCTG
TATAGTAATT CAGCCTTTGC CACTATGGTT GAGTTACCGT TGACAAAAGT ATTTGGCTTA
CGATTCAGAG AGTTTGTGTC ACCCGATATG CAGTCGGCAT TCGACCTTCT CTTCAACGAA
AGCTGGTTAG GGAATAAGAA AGAGGAGCTA TCCATTAAAA GTATCAACCA CACGATCGTA
CCGTGTCTTT TATCGGTAAC CCCCATGCAG TTGGACGGCG GAGACTGTCT AAGCCTGATT
CTTACGGATT TAACAGCGCA GAAAGAAACC CAAAAGCTGT TAAAGATAAA AAATGAAGAA
CTGGCCCAAA CGAACACTGC CCTCGAAATC AGCAATCAGG CGCTGAACCG CTCCAACAGT
AACCTTCAGC AATTTGCTTA CGTTGCCAGT CACGATTTGC AGGAACCTCT CCGCAAAGTT
CAGCAGTTTG GCGACCTCCT CAAAAACAGA TACGCCGGGC AGTTGGGCGA TGGGGTTAAC
TACCTAGAAC GGATGCAGTC AGCAGCGAGC CGTATGTCGA CGCTGATTCG CGATCTGCTG
AGTTTCTCCC GCATTTCTAC CCAACAGGAT ACCATTGCAC CCGTTTCGCT GTCGGCCGTC
TTTAAAAATG TGCTGACCGA TTTAGATCTG CGCATTCAGG AAACCAATGC GATGATCACC
TTAAGTCCGC TGCCTGACAT CCAGGGTGAC CAGTCACAGC TGGAGCAATT GTTTCAGAAC
CTGGTGAGTA ATGCGCTGAA ATTCCGCCGT CCCGGCGAAC GTCCTGTTAT TCATGTAAGC
TCGAAGCTGC TACCCACCGA AGACTTACCA GCGTTCGTTA AGCCGACCCG ACAGACAGCC
GCTTACCATC GCATCGACGT AAGCGATAAT GGTATTGGTT TTGATGAGAA GTACATTGAC
CGGATTTTCC AGGTATTCCA GCGATTACAC GGCAAAAACG AATACGTCGG AACGGGGATT
GGCCTCGCGA TCTGCGAGAA AGTAGTAGCC AATCACGGCG GTGCCATCAG CGCCAGCAGC
CAGCCCGGAC AGGGAGCAAC GTTCAGCGTA TACCTGCCAA AGCCTTAA
|
|---|
| Protein sequence | MNGAKPYEQL LAENENLRWQ LYEATETIQA IRTGQIDALV VQGTEGHELY TLKTADHTYR
IFIETMNEGA VTLNREGFIL YSNSAFATMV ELPLTKVFGL RFREFVSPDM QSAFDLLFNE
SWLGNKKEEL SIKSINHTIV PCLLSVTPMQ LDGGDCLSLI LTDLTAQKET QKLLKIKNEE
LAQTNTALEI SNQALNRSNS NLQQFAYVAS HDLQEPLRKV QQFGDLLKNR YAGQLGDGVN
YLERMQSAAS RMSTLIRDLL SFSRISTQQD TIAPVSLSAV FKNVLTDLDL RIQETNAMIT
LSPLPDIQGD QSQLEQLFQN LVSNALKFRR PGERPVIHVS SKLLPTEDLP AFVKPTRQTA
AYHRIDVSDN GIGFDEKYID RIFQVFQRLH GKNEYVGTGI GLAICEKVVA NHGGAISASS
QPGQGATFSV YLPKP
|
|---|
| |