Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1870 |
Symbol | |
ID | 8725607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2259256 |
End bp | 2259804 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | YceI family protein |
Protein accession | YP_003386714 |
Protein GI | 284036784 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0076574 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCAC AACCCGCAAC CGCTACTACC TGGTCTATTG ACCCAACCCA CTCTGAAATT CAATTTAAAG TTAAACACCT CGTTATTTCA ACCGTAACGG GTTCGTTTGG CCAATACGAA GGACAGGTAG AAACTACAGG GGATGATTTT GCCGATGCCA AAGTCTCATT TTCGGCTGAT ATAACCAGCA TTAGCACCGG TCAGGAACAA CGCGATGGCC ACCTGAAATC AGCCGATTTC TTTGATGCCG AGCAGTTTCC AAAACTGACC TTTGTATCGA CGTCCATGAC CAAAACGGGT GATGATACCT ATTCACTGAC GGGCGATCTA ACCATTCGCG GAGTTACGAA GCCGGTTACG CTGAAAGTTG AGCATGGCGG ACAGATGGTG GATTTCTACG GACAAACCAA AGCTGGTTTT GAAGCTACCG GTACCATCAA GCGTAAAGAA TTTGGCCTAA CCTGGGATGG CGTTACCGAA GCGGGTGGCG TTGTTGTTAG CGACGACGTT AAGCTGGTCC TGAATATTCA GTTAACGAAG CAGGCATAA
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Protein sequence | MEAQPATATT WSIDPTHSEI QFKVKHLVIS TVTGSFGQYE GQVETTGDDF ADAKVSFSAD ITSISTGQEQ RDGHLKSADF FDAEQFPKLT FVSTSMTKTG DDTYSLTGDL TIRGVTKPVT LKVEHGGQMV DFYGQTKAGF EATGTIKRKE FGLTWDGVTE AGGVVVSDDV KLVLNIQLTK QA
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