Gene Slin_1870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1870 
Symbol 
ID8725607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2259256 
End bp2259804 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content48% 
IMG OID 
ProductYceI family protein 
Protein accessionYP_003386714 
Protein GI284036784 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0076574 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCAC AACCCGCAAC CGCTACTACC TGGTCTATTG ACCCAACCCA CTCTGAAATT 
CAATTTAAAG TTAAACACCT CGTTATTTCA ACCGTAACGG GTTCGTTTGG CCAATACGAA
GGACAGGTAG AAACTACAGG GGATGATTTT GCCGATGCCA AAGTCTCATT TTCGGCTGAT
ATAACCAGCA TTAGCACCGG TCAGGAACAA CGCGATGGCC ACCTGAAATC AGCCGATTTC
TTTGATGCCG AGCAGTTTCC AAAACTGACC TTTGTATCGA CGTCCATGAC CAAAACGGGT
GATGATACCT ATTCACTGAC GGGCGATCTA ACCATTCGCG GAGTTACGAA GCCGGTTACG
CTGAAAGTTG AGCATGGCGG ACAGATGGTG GATTTCTACG GACAAACCAA AGCTGGTTTT
GAAGCTACCG GTACCATCAA GCGTAAAGAA TTTGGCCTAA CCTGGGATGG CGTTACCGAA
GCGGGTGGCG TTGTTGTTAG CGACGACGTT AAGCTGGTCC TGAATATTCA GTTAACGAAG
CAGGCATAA
 
Protein sequence
MEAQPATATT WSIDPTHSEI QFKVKHLVIS TVTGSFGQYE GQVETTGDDF ADAKVSFSAD 
ITSISTGQEQ RDGHLKSADF FDAEQFPKLT FVSTSMTKTG DDTYSLTGDL TIRGVTKPVT
LKVEHGGQMV DFYGQTKAGF EATGTIKRKE FGLTWDGVTE AGGVVVSDDV KLVLNIQLTK
QA