Gene Slin_1821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1821 
Symbol 
ID8725558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2198127 
End bp2198675 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content46% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386665 
Protein GI284036735 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.758753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATACA GTTTAGAGTG GCTTGTCGAG AATTTTGAGC GCGGAAAACG GATAAAGTAC 
CTCTTCTTTT GGGGGCATCA AAAAAGCAAA AGTGGTGATT TAACCGCTTC GTGTTTCAGC
CAGTGGTGGA CTTCGCCGTT TATAATTGAT AAGGTTAAAT ACAATACAGC GGAACACTGG
ATGATGGCTC AAAAGGCCTT GCTATTCGGT GACAAAGAAG TGTATGACAA AATCATTGTT
GCCAAATCGC CAGCTGAAGC CAAAAGCCTG GGTAGGCAAG TGCGTAATTT TGACGAAGCT
ACTTGGAGTG CCAAACGCTC TGGAATAGTA GTTCAGGGCA GTTTACAGAA ATTTACACAG
CATCCCGACC TCAAGGAGTT TCTACTCAAC ACCAAAGAAC GGGTGTTGGC CGAAGCCAGT
CCAGTGGACA AAATTTGGGG CATTGGGCTG GCAGCTGACA GCGACAAGGC AGAAAACCCA
AAACGTTGGA ACGGACTGAA TTTGCTTGGG TTTGCCCTAA TGGAAGTTAG GGACATACTT
AGAAAGTAG
 
Protein sequence
MTYSLEWLVE NFERGKRIKY LFFWGHQKSK SGDLTASCFS QWWTSPFIID KVKYNTAEHW 
MMAQKALLFG DKEVYDKIIV AKSPAEAKSL GRQVRNFDEA TWSAKRSGIV VQGSLQKFTQ
HPDLKEFLLN TKERVLAEAS PVDKIWGIGL AADSDKAENP KRWNGLNLLG FALMEVRDIL
RK