| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1814 |
|---|
| Symbol | |
|---|
| ID | 8725551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 2190137 |
|---|
| End bp | 2190967 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | Lytic transglycosylase catalytic |
|---|
| Protein accession | YP_003386658 |
|---|
| Protein GI | 284036728 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.322189 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATTA TTCGACCGGC TGTCACTGTT GCGGCTAAGC TTATTGCACC AGGTGTCGGC
TCTACCGCCC TTCCCAATCT CCACCCTACC AAAACCAGTG CAGTAACCCG GTCCGATGCG
ACCTCCCTCC TAACCCGCCG ACCTGATGTG TCGGCAATGC TTGCTCCTGT CGCAACAAAC
GCACCCGAGT TACCGCTCCT CGATGTTAAC TTCTGTGGCG AATGTTTACC GCTCGACCAA
ACGGATGTTG TTGACCGCTG GAAACATGTG TTCACGCTTT TCCGGAGCCA TGCCAGCGAT
TTGGGTAATC TTCGCCAGCG GGCCGAGGCT TTTTTTCCAA TAATTGACCC TATTCTGGAG
GAATACGAGA TTCCGGACGA TTTTCGATAT GTCCCTCTGG CCGAGAGTGC ATTACGACCC
AAAGCCGTTT CGCGGGCTGG TGCGGCAGGA TACTGGCAAT TGATGCCAGC TACTGCCCGT
GCGTTAGGGC TCAAAGTAAG TGGCAAAACT GATGAACGGT TCAATGTTCA GAAAGCCACC
GTTGCTGCCT GTCGGTATCT GCGCAAATTA TACGACCAGC TAGGCTCTTG GTCGCTGGTT
GCTGCAGCTT ATAACGCCGG GCCAGGCTAC ATGAAAAATC AGCTCAAACG GGACGATCAC
CGCGACTATT ACCGGATGAG TTTGCCCCGC GAAACCCGGT ATTACTTGTA TCGGGTGCTT
CTCTACAAGG AAGTCTTGTC CCGCCCGGAT GATTACTCGT CTTATTTATC CCCCGAAACG
CAAACGGCCT ATCATCCGTT TAACCGGTTT ATTCTGGAAC GTGCCAGTTA G
|
|---|
| Protein sequence | MAIIRPAVTV AAKLIAPGVG STALPNLHPT KTSAVTRSDA TSLLTRRPDV SAMLAPVATN
APELPLLDVN FCGECLPLDQ TDVVDRWKHV FTLFRSHASD LGNLRQRAEA FFPIIDPILE
EYEIPDDFRY VPLAESALRP KAVSRAGAAG YWQLMPATAR ALGLKVSGKT DERFNVQKAT
VAACRYLRKL YDQLGSWSLV AAAYNAGPGY MKNQLKRDDH RDYYRMSLPR ETRYYLYRVL
LYKEVLSRPD DYSSYLSPET QTAYHPFNRF ILERAS
|
|---|
| |