Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1814 |
Symbol | |
ID | 8725551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2190137 |
End bp | 2190967 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_003386658 |
Protein GI | 284036728 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.322189 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATTA TTCGACCGGC TGTCACTGTT GCGGCTAAGC TTATTGCACC AGGTGTCGGC TCTACCGCCC TTCCCAATCT CCACCCTACC AAAACCAGTG CAGTAACCCG GTCCGATGCG ACCTCCCTCC TAACCCGCCG ACCTGATGTG TCGGCAATGC TTGCTCCTGT CGCAACAAAC GCACCCGAGT TACCGCTCCT CGATGTTAAC TTCTGTGGCG AATGTTTACC GCTCGACCAA ACGGATGTTG TTGACCGCTG GAAACATGTG TTCACGCTTT TCCGGAGCCA TGCCAGCGAT TTGGGTAATC TTCGCCAGCG GGCCGAGGCT TTTTTTCCAA TAATTGACCC TATTCTGGAG GAATACGAGA TTCCGGACGA TTTTCGATAT GTCCCTCTGG CCGAGAGTGC ATTACGACCC AAAGCCGTTT CGCGGGCTGG TGCGGCAGGA TACTGGCAAT TGATGCCAGC TACTGCCCGT GCGTTAGGGC TCAAAGTAAG TGGCAAAACT GATGAACGGT TCAATGTTCA GAAAGCCACC GTTGCTGCCT GTCGGTATCT GCGCAAATTA TACGACCAGC TAGGCTCTTG GTCGCTGGTT GCTGCAGCTT ATAACGCCGG GCCAGGCTAC ATGAAAAATC AGCTCAAACG GGACGATCAC CGCGACTATT ACCGGATGAG TTTGCCCCGC GAAACCCGGT ATTACTTGTA TCGGGTGCTT CTCTACAAGG AAGTCTTGTC CCGCCCGGAT GATTACTCGT CTTATTTATC CCCCGAAACG CAAACGGCCT ATCATCCGTT TAACCGGTTT ATTCTGGAAC GTGCCAGTTA G
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Protein sequence | MAIIRPAVTV AAKLIAPGVG STALPNLHPT KTSAVTRSDA TSLLTRRPDV SAMLAPVATN APELPLLDVN FCGECLPLDQ TDVVDRWKHV FTLFRSHASD LGNLRQRAEA FFPIIDPILE EYEIPDDFRY VPLAESALRP KAVSRAGAAG YWQLMPATAR ALGLKVSGKT DERFNVQKAT VAACRYLRKL YDQLGSWSLV AAAYNAGPGY MKNQLKRDDH RDYYRMSLPR ETRYYLYRVL LYKEVLSRPD DYSSYLSPET QTAYHPFNRF ILERAS
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