Gene Slin_1728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1728 
Symbol 
ID8725465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2076567 
End bp2078174 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content51% 
IMG OID 
ProductNitrilase/cyanide hydratase and apolipoprotein N- acyltransferase 
Protein accessionYP_003386573 
Protein GI284036643 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.309327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATATTC AAACCAGAAC ATTACAGAAA GAAGACTACC ATGACCTGAA AGAGGTTATG 
ATTGAAGTCT ACAGCGGCAT TGGTGGCGAC TATTGGCCCA AAAGCTCAAT TACAAAACTC
CTCAGTATTT TTCCGGAGGG TCAGTTTTGT GTAGAAGTCG ATGGAAAAGT AGTAGCAATC
GCCCTATCTA TACGAGTGCA ATACGCTCAG TTTGGTGATA ACCATACGTA CCACGAAATT
ACGGGCGGGT ATACCTTCAA AACTCACTCC GACGAAGGTG ATTACATGTA TGGCATCGAG
GTGTTCGTTC ACCCGGACTA CCGCGACCTT CGCCTTGGCC GACGCCTGTA CGACGCCCGA
AAAGAACTTT GCGAGCAACT GAATCTGAAG GGTATCCTGG CCGGAGGGCG CATTCCGAAC
TACAATAAAT ACGCCGACGA GCTGAGCCCG CGCGAGTACA TCGCGAAGGT GAAGCAGAAG
GAGATTTATG ACCCCACGCT CACCTTTCAG CTGTCGAACG ATTTCCACGT CCGGAAGGTA
TTACGCGGCT ACCTCCCCGG CGATTCCGAA TCAAAGGAAT ACGCGACCCT ACTGGAGTGG
ATCAACATTT ATTACGTTGC AGAGAAAGAC AAAAAGCCGC ATACGGATTC GATTATCCGG
CTGGGTGTCA TTCAATGGCA AATGCGGTTG TTCAAAAACC TGAATGCATT TTTGGAACAG
GTTGAGTTCT TCGCCAATGC CGTCAGTGAT TACAGGGCTG ATTTTATGGT GCTGCCGGAG
TTTTTCAACA CGCCCCTGAT GGCCGACTTT AACGATCTGC CTGAGCCGGT GGCTATTCGT
AAACTGGCCG ATTTTACGGA AGCTGTTCGC GACAAACTCT GCGAACTGGC CATCTCTTAT
AATGTCAACA TCGTAGGTGG CAGCATGCCG CTCGTCGATA CGGACGGCAA ACTCTATAAC
GTTGCCTACC TCTGCCGACG CGACGGCTCG TTTGAAGAGT ACCGCAAAAT TCACATCACA
CCTAACGAAG TAAAACATTA CGGCATGGTG GGGGGCTACG AGATTCGGGC ATTCGACACG
GACTGCGGTA AAATTGGCAT GTTGATCTGC TACGATGTCG AATTTCCGGA GCTGGGACGG
ATTCTGGCCC AACAGGGAAT GCAAATCCTG TTCGTCCCCT TCCTGACCGA CACCCAGAAT
GGCTACTCAC GCGTTCGGCA CTGCGCCCAG GCGAGGGCCA TCGAAAACGA GTGCTATGTG
GCTATTTCGG GCTGTGTGGG CAACCTGCCC CGTGTTCAGA ATATGGACAT CAACTACGCG
CAATCGGCGG TGTTTACCCC ATCCGACTTC CAGTTCCCAA CGAATGCGGT CAAAGCCGAA
GCCACGACCA ACACCGAAAT GGTGCTCATA GCCGACGTAG ATTTAAGTCT ATTGAAGGAA
CTGCACGAAC ATGGCTCGGT GCAGGTGTTA AAAGACCGCC GGACTGATTT GTACGATGTG
ACGCTAAAAA AAGCGGCCAA GAAAGCCATG AAGCAGAAAA AAGCGTCGCC CGATAACGAC
CCGGAACAAG TCGCACCCAT CATAGTGGTG TCGGAGGTTA ATGGTTAA
 
Protein sequence
MHIQTRTLQK EDYHDLKEVM IEVYSGIGGD YWPKSSITKL LSIFPEGQFC VEVDGKVVAI 
ALSIRVQYAQ FGDNHTYHEI TGGYTFKTHS DEGDYMYGIE VFVHPDYRDL RLGRRLYDAR
KELCEQLNLK GILAGGRIPN YNKYADELSP REYIAKVKQK EIYDPTLTFQ LSNDFHVRKV
LRGYLPGDSE SKEYATLLEW INIYYVAEKD KKPHTDSIIR LGVIQWQMRL FKNLNAFLEQ
VEFFANAVSD YRADFMVLPE FFNTPLMADF NDLPEPVAIR KLADFTEAVR DKLCELAISY
NVNIVGGSMP LVDTDGKLYN VAYLCRRDGS FEEYRKIHIT PNEVKHYGMV GGYEIRAFDT
DCGKIGMLIC YDVEFPELGR ILAQQGMQIL FVPFLTDTQN GYSRVRHCAQ ARAIENECYV
AISGCVGNLP RVQNMDINYA QSAVFTPSDF QFPTNAVKAE ATTNTEMVLI ADVDLSLLKE
LHEHGSVQVL KDRRTDLYDV TLKKAAKKAM KQKKASPDND PEQVAPIIVV SEVNG