Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1728 |
Symbol | |
ID | 8725465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2076567 |
End bp | 2078174 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase |
Protein accession | YP_003386573 |
Protein GI | 284036643 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.309327 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATATTC AAACCAGAAC ATTACAGAAA GAAGACTACC ATGACCTGAA AGAGGTTATG ATTGAAGTCT ACAGCGGCAT TGGTGGCGAC TATTGGCCCA AAAGCTCAAT TACAAAACTC CTCAGTATTT TTCCGGAGGG TCAGTTTTGT GTAGAAGTCG ATGGAAAAGT AGTAGCAATC GCCCTATCTA TACGAGTGCA ATACGCTCAG TTTGGTGATA ACCATACGTA CCACGAAATT ACGGGCGGGT ATACCTTCAA AACTCACTCC GACGAAGGTG ATTACATGTA TGGCATCGAG GTGTTCGTTC ACCCGGACTA CCGCGACCTT CGCCTTGGCC GACGCCTGTA CGACGCCCGA AAAGAACTTT GCGAGCAACT GAATCTGAAG GGTATCCTGG CCGGAGGGCG CATTCCGAAC TACAATAAAT ACGCCGACGA GCTGAGCCCG CGCGAGTACA TCGCGAAGGT GAAGCAGAAG GAGATTTATG ACCCCACGCT CACCTTTCAG CTGTCGAACG ATTTCCACGT CCGGAAGGTA TTACGCGGCT ACCTCCCCGG CGATTCCGAA TCAAAGGAAT ACGCGACCCT ACTGGAGTGG ATCAACATTT ATTACGTTGC AGAGAAAGAC AAAAAGCCGC ATACGGATTC GATTATCCGG CTGGGTGTCA TTCAATGGCA AATGCGGTTG TTCAAAAACC TGAATGCATT TTTGGAACAG GTTGAGTTCT TCGCCAATGC CGTCAGTGAT TACAGGGCTG ATTTTATGGT GCTGCCGGAG TTTTTCAACA CGCCCCTGAT GGCCGACTTT AACGATCTGC CTGAGCCGGT GGCTATTCGT AAACTGGCCG ATTTTACGGA AGCTGTTCGC GACAAACTCT GCGAACTGGC CATCTCTTAT AATGTCAACA TCGTAGGTGG CAGCATGCCG CTCGTCGATA CGGACGGCAA ACTCTATAAC GTTGCCTACC TCTGCCGACG CGACGGCTCG TTTGAAGAGT ACCGCAAAAT TCACATCACA CCTAACGAAG TAAAACATTA CGGCATGGTG GGGGGCTACG AGATTCGGGC ATTCGACACG GACTGCGGTA AAATTGGCAT GTTGATCTGC TACGATGTCG AATTTCCGGA GCTGGGACGG ATTCTGGCCC AACAGGGAAT GCAAATCCTG TTCGTCCCCT TCCTGACCGA CACCCAGAAT GGCTACTCAC GCGTTCGGCA CTGCGCCCAG GCGAGGGCCA TCGAAAACGA GTGCTATGTG GCTATTTCGG GCTGTGTGGG CAACCTGCCC CGTGTTCAGA ATATGGACAT CAACTACGCG CAATCGGCGG TGTTTACCCC ATCCGACTTC CAGTTCCCAA CGAATGCGGT CAAAGCCGAA GCCACGACCA ACACCGAAAT GGTGCTCATA GCCGACGTAG ATTTAAGTCT ATTGAAGGAA CTGCACGAAC ATGGCTCGGT GCAGGTGTTA AAAGACCGCC GGACTGATTT GTACGATGTG ACGCTAAAAA AAGCGGCCAA GAAAGCCATG AAGCAGAAAA AAGCGTCGCC CGATAACGAC CCGGAACAAG TCGCACCCAT CATAGTGGTG TCGGAGGTTA ATGGTTAA
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Protein sequence | MHIQTRTLQK EDYHDLKEVM IEVYSGIGGD YWPKSSITKL LSIFPEGQFC VEVDGKVVAI ALSIRVQYAQ FGDNHTYHEI TGGYTFKTHS DEGDYMYGIE VFVHPDYRDL RLGRRLYDAR KELCEQLNLK GILAGGRIPN YNKYADELSP REYIAKVKQK EIYDPTLTFQ LSNDFHVRKV LRGYLPGDSE SKEYATLLEW INIYYVAEKD KKPHTDSIIR LGVIQWQMRL FKNLNAFLEQ VEFFANAVSD YRADFMVLPE FFNTPLMADF NDLPEPVAIR KLADFTEAVR DKLCELAISY NVNIVGGSMP LVDTDGKLYN VAYLCRRDGS FEEYRKIHIT PNEVKHYGMV GGYEIRAFDT DCGKIGMLIC YDVEFPELGR ILAQQGMQIL FVPFLTDTQN GYSRVRHCAQ ARAIENECYV AISGCVGNLP RVQNMDINYA QSAVFTPSDF QFPTNAVKAE ATTNTEMVLI ADVDLSLLKE LHEHGSVQVL KDRRTDLYDV TLKKAAKKAM KQKKASPDND PEQVAPIIVV SEVNG
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