Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1688 |
Symbol | |
ID | 8725425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2023028 |
End bp | 2024458 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | RNA methyltransferase, TrmA family |
Protein accession | YP_003386533 |
Protein GI | 284036603 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.618499 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAGGA AGATTCATAA AACACCCGAA CGGTTGGCAC ATGTTCGTAT CGATGCCGTA GCCGCCGAAG GGAAGTGTAT TGTACGTACT GACGAAGGCG TAATTTTTGT TGAAAACCCC ACCGGTGGAC CGGGTGTGGC CCCCGGCGAT GTGGTAGACC TGCGCATTAC CAATACCAAA AAGCAGTACC GCGAAGCCGT TGCCGAACGC GTTCATGAAT GGTCTGCGGT CCGTACTGAG CCTTTTTGTG AGCATTTTGG AACCTGTGGC GGCTGCAAGT GGCAGCATAT TCAATACAGC GAACAACTTG GCTTTAAACA CCAGCAGGTG GTCGATCATC TGACACGTAT TGGTAAGGTG GAACTGCCCG AGTTCCGGCC CATTATGCCT GCTCATCCAA CCCAGTACTA TCGGAACAAG CTTGAATTTA CCTGCGCCGA AGGCCGCTGG CTGACCTCGG CCGAAGTAGG TACTAATCAA CCGATGGACC AGCGGGCGGT AGGCTTCCAC GTGCCCGGCC GGTTCGATAA AGTGCTGCCC ATTCGGCATT GTTACCTCCA GCCCGACCCG TCCAACGCTA TCCGCGAAGC CATTGACGCT TATGTGCTTC AGCATGACAT GACGTTGTAT AACCTGAAGA TGCATACCGG TTTTCTGCGA ACACTCATCA TCCGCACTGC CGATACTACG CAGCAGGTAA TGGTAACGTT GCAGGTAGCC CAGGACAACC CCGAATTGCT CAACGGGCTG ATGACGTATT TGCAGACGCT GTTCCCACAG ATCACCTCCC TGAACTACAT TCTGAACACC AAAAAGAACG ATAGCTATCA GGATCAGGAG GTGGTCAACT GGGCCGGAAA ACCCTACATC GAGGAGCAGA TGGAAGCGCT CACCTTCCGG ATAGGCCCCA AATCGTTTTA CCAGACCAAT GCCCAGCAAG CGTATAACCT TTATAAAGTG GCCCGCGAAT TTGCCGGTCT CACCGGTCAG GAACGCGTGT ACGATTTATA TACGGGTACG GGCACCATTG CGCTTTTTGT GGCTCGTTTG GCCAAACATG TCGTTGGCGT GGAGTATGTC GAAGCATCGG TAGCCGATGC CCGCGTTAAT GCACAAGTGA ACGGAATTGC CAACACGACC TTTGTTGCGG GGGATATGAA GGCGATTCTG ACCGACGAAT TTTTTGCAGA ACACGGCCGT CCGGATGTGG TCATCACCGA TCCGCCCCGT GCTGGTATGG ATGAGGCCGT TACCAGGCAG CTACTTAAAG CCGCTCCGGA ACGGATTGTT TACGTAAGTT GCAACACCGC TACCCAGGCC CGCGATCTGG CGATTCTGGA CGAAGGATAT ACCGTAACGG GTGTGCAACC GGTCGATATG TTCCCGCATA CGCACCATGT CGAAAATGTA GTTGTCCTGA CGAAGCGGTA G
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Protein sequence | MRRKIHKTPE RLAHVRIDAV AAEGKCIVRT DEGVIFVENP TGGPGVAPGD VVDLRITNTK KQYREAVAER VHEWSAVRTE PFCEHFGTCG GCKWQHIQYS EQLGFKHQQV VDHLTRIGKV ELPEFRPIMP AHPTQYYRNK LEFTCAEGRW LTSAEVGTNQ PMDQRAVGFH VPGRFDKVLP IRHCYLQPDP SNAIREAIDA YVLQHDMTLY NLKMHTGFLR TLIIRTADTT QQVMVTLQVA QDNPELLNGL MTYLQTLFPQ ITSLNYILNT KKNDSYQDQE VVNWAGKPYI EEQMEALTFR IGPKSFYQTN AQQAYNLYKV AREFAGLTGQ ERVYDLYTGT GTIALFVARL AKHVVGVEYV EASVADARVN AQVNGIANTT FVAGDMKAIL TDEFFAEHGR PDVVITDPPR AGMDEAVTRQ LLKAAPERIV YVSCNTATQA RDLAILDEGY TVTGVQPVDM FPHTHHVENV VVLTKR
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