Gene Slin_1667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1667 
Symbol 
ID8725402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2003693 
End bp2004538 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content49% 
IMG OID 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003386513 
Protein GI284036583 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTA CTCTGGAGCA GATCAGCCCG GATACCGACA GTTCCTTTCA TATACTGGTA 
ACGCCCCATC TGAGCGACGT TTTCCTTTGG CACTACCATC CGGAATATGA AATCGTTTAT
ATCGAAGGCG CAAATGGCAC CCGGCACGTC GGCGATCATA TTTCGCGTTA CGAAGGCAGC
GACCTGGTCT TTATTGGCCC GAATATTCCA CACCTCAATT TTGATTACGG GGTTAAAACA
GACCACACAA AAGTTGTTGT GCAATTGAAG GAAAATTTTC TGGGCGAGGT GCTCTGGCAG
GCTCCGGAAT TTGCCGCTAT CACCCAACTG TTTGCCCGCG CCCGGTCGGG AATTTCCTTT
TATGGACAAA CCAAACAACG CGTGGGCGAA CGTCTTAATC AGCTGGCAAA CCTCCCTCCT
TTCGAGCGCC TGATGCAGTT GCTGGGCATC TTCCAGCTGC TGGCAACCAG TCAGGAATAT
ACACCCCTTC AGGGCGAAGC TGTTGCCAGT GCCTACAACC TTAACGAACA GCAGCGACTC
AAACGCGTTA ACCAATTCAT TGCCGAACAC TATACCCGCC GACTGTCGAT TTCCGAAGCG
GCAACGGTTG CGAGCCTCAC GGAAGCTGCC TTTTGCCGAT ATTTCAAACG CATGACCCGT
CTGACATTTA CCCAGTTTTT AAATCAATAT CGAATCAGTC AGGCGCAGAA ACTGTTACTG
TTAGATAATA CCGTATCGGA AGCCTGTTTT GCGTGCGGTT TCGAGAGTCT GTCCTATTTT
AACAAGATTT TCCGGCGTGT AACCGGCGAA AACCCGCTAC AGTTTAAAAA GCGCCACAAA
ATATGA
 
Protein sequence
MKVTLEQISP DTDSSFHILV TPHLSDVFLW HYHPEYEIVY IEGANGTRHV GDHISRYEGS 
DLVFIGPNIP HLNFDYGVKT DHTKVVVQLK ENFLGEVLWQ APEFAAITQL FARARSGISF
YGQTKQRVGE RLNQLANLPP FERLMQLLGI FQLLATSQEY TPLQGEAVAS AYNLNEQQRL
KRVNQFIAEH YTRRLSISEA ATVASLTEAA FCRYFKRMTR LTFTQFLNQY RISQAQKLLL
LDNTVSEACF ACGFESLSYF NKIFRRVTGE NPLQFKKRHK I