Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1627 |
Symbol | |
ID | 8725362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1959412 |
End bp | 1959813 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003386473 |
Protein GI | 284036543 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0696983 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCTTTG GAACGATATT GCGTAAAAAC CGGGAAAAGA AGCGACTCTC TCAAAAAGAG GTGGCAGAAC ACATTGGCAT AGCACAGGCT ACTTACCACA ATTGGGAAAC AGAACAGTCG AGTTTTCGAG TAGAGTATTT GCCCAAATTA GCCGAGGTAT TTGACGTGGC TATGGGAGAT TTAATGCCTG AAGGCACTAC GTTGAAACTG ATGAACAATC AGCATCAGAA GAACCACGAT AGATCAGTAG TAGGTTTTGA TGTTACTATA AACGAGTCGC GTGAGCTATA TACAGAGTTG GTGAATAGTA AGGATGAAAT AATCCGATTG TTAAAGGAAG AAAATACATT GTTAAAAGTT CGTAATGCAC AATTAGATGA AAACCAGAAA AGAGATGCTT AA
|
Protein sequence | MTFGTILRKN REKKRLSQKE VAEHIGIAQA TYHNWETEQS SFRVEYLPKL AEVFDVAMGD LMPEGTTLKL MNNQHQKNHD RSVVGFDVTI NESRELYTEL VNSKDEIIRL LKEENTLLKV RNAQLDENQK RDA
|
| |