Gene Slin_1616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1616 
Symbol 
ID8725351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1947074 
End bp1948030 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content48% 
IMG OID 
Productribonuclease BN 
Protein accessionYP_003386463 
Protein GI284036533 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.119172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.116701 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGACA CGTTAATGAA TATGAGGGCG ATGCGAAACA TCCGTGTCTG GCTGTATAAG 
CATCACCCTT TCAACTCCCG CATCACCTGG TATTCTTTCC TGAAAAAGAT GCTGGATCAG
ATTACAGACA ACAACACCAG TGAGCGGGCA GCTTCTGTTT CCTACAGTCT GATTCTGGCG
GTTTTTCCTA CGGTTATCTT CTTCTTCACG CTTATTCCTT TCATCACCTT TATTCCAAAT
CTGGAAGAGC AGATCATGGG CTTTTTCCGG GAGGTTCTCC CGGGAAATAC GTTCAGCAGT
GTCGATACAA CTATTCGCGA CATTGTCAGC CGCCCCCGTA GTGGTGTGCT TTCCTTTGGC
TTTTTACTGG CCTTATACTC GGCCACGAGT GGCCTTGTGG CCCTCATGCA GGCCTTTAAC
TCCTCTTATC ACTCAGACGA AAGACGGGGC TTTTTCAAAG TCCGACTTGT AGCCATCGGT
TTAACCTTTA CACTGGCCTT TGCCCTGATT TTAGCCATCG TCGTGTTGAT TATCGGTGGC
ATTATCAGTG ACTATCTCCT TCATTTCGGG CTGCTCAACA ATGCGCTCTT CATTAATTTA
CTGGCCATTA CACGCTATCT TGTCGTGTTT GCCGTGTTTG TCGGCACGGT TTCCGTTATT
TATCGATACG GTCCGGATGT TCGTATGAAG TGGGTTTTTA TTACGCCCGG TGCCGTAACG
GCCTCCTTAC TTATCGTGCT TACCACCCTC GGCTTCTCGT ATTACGTCTC CAATTTCGGC
TCGTATAACA AGGTTTATGG CTCCATCGGC ACCCTGATTG CCCTGATGAT CTGGATAAAC
CTTATTTCGC TGTTACTCAT TCTGGGCTTT GAAATGAACG TAGCCCTTTA CAATCTGGAA
GGTGACAGAA GCCCCGACGT AGCGGCTAAA ACGACAAACG CCACCCCTGA AATTTGA
 
Protein sequence
MFDTLMNMRA MRNIRVWLYK HHPFNSRITW YSFLKKMLDQ ITDNNTSERA ASVSYSLILA 
VFPTVIFFFT LIPFITFIPN LEEQIMGFFR EVLPGNTFSS VDTTIRDIVS RPRSGVLSFG
FLLALYSATS GLVALMQAFN SSYHSDERRG FFKVRLVAIG LTFTLAFALI LAIVVLIIGG
IISDYLLHFG LLNNALFINL LAITRYLVVF AVFVGTVSVI YRYGPDVRMK WVFITPGAVT
ASLLIVLTTL GFSYYVSNFG SYNKVYGSIG TLIALMIWIN LISLLLILGF EMNVALYNLE
GDRSPDVAAK TTNATPEI