| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1615 |
|---|
| Symbol | |
|---|
| ID | 8725350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 1945781 |
|---|
| End bp | 1946776 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_003386462 |
|---|
| Protein GI | 284036532 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.665959 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.16082 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCCTT TTCTCAACCA GATTAAGCCT TGGGTGAGTG TCATATGCAT CTCCTACAAC
CACGCGTCCT ACGTTCAACA GGCGCTTCAA TCGGTCGTTG ATCAGGATTA TCCAAATGTC
GAGCTAATTG TTATCGACAA TGGCAGTATA GATCGGTCAG CCGAGTTCAT TACCCGGTTT
ACCGAACGGC ATTCCGCTAT TCGATTTATC CAGAATCCGG TTAACGTTGG CTTAAACCGG
GCATTCAATC AGGGACTGGC GTTGGCCGAA GGTCGCTATG TGATCGATCT GTCGGCCGAT
GATGTATTGC TTCCGGGCCG TCTCTCGAAA CAGGTTGCCC AGTTTGAGAA GCTGGCGGGT
CCTTATGCCG TTGTGTTTTC CAATGCTGCT TACATTGACC GCAGCGGTCG AGAAGTGGGC
CTACATTATG TCGTAGATGC TAGTGGGCAT GCGCGCTTAC CGGTGCCATC GGGCAATGTG
TTCAAGCCAA TTCTGGAGTC TTATTTTATA TGCACCCCAA CCATGATGAT GCGTCGGGAC
GTTCTGAATG AACTGGGCGG CTACGATGAA TCCCTGGCCT ACGAAGACTT CGACTTCTGG
GTCCGTTCGG CCCGGCTCTA TCATTATGCG TATCTGGATG AAATACTGAC CCAGAAACGC
CTTACACCCG ATTCCTTTTC GGCCCGGATC GTGTATACAA ATACGACCCT GCTGCACTCC
ACACTGGCCG TGTGTTATAA AGCCTTCGAG CGGTGTGTTA CCCCCGATGA ATTCCGTGCC
CTGGCCGGAC GCGTCAGACG GTTTATCCGA AAAGCTTTTT ATGTCGAGCA ATTCGATCTG
GCCCTTGAGT TTGGCGACCT TCTTTACCAT ATTGAACAAC CGGATTGGCA AAGCAAGCTG
ATTTTAGGTC TGAGTAAACT CCATCTTCCG GTCAATAAAC TATACCGGCG TTACCTCAAG
TGGAGCCCGG TACTTCATTC GGCGAAACTG GATTAA
|
|---|
| Protein sequence | MSPFLNQIKP WVSVICISYN HASYVQQALQ SVVDQDYPNV ELIVIDNGSI DRSAEFITRF
TERHSAIRFI QNPVNVGLNR AFNQGLALAE GRYVIDLSAD DVLLPGRLSK QVAQFEKLAG
PYAVVFSNAA YIDRSGREVG LHYVVDASGH ARLPVPSGNV FKPILESYFI CTPTMMMRRD
VLNELGGYDE SLAYEDFDFW VRSARLYHYA YLDEILTQKR LTPDSFSARI VYTNTTLLHS
TLAVCYKAFE RCVTPDEFRA LAGRVRRFIR KAFYVEQFDL ALEFGDLLYH IEQPDWQSKL
ILGLSKLHLP VNKLYRRYLK WSPVLHSAKL D
|
|---|
| |