Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1611 |
Symbol | |
ID | 8725345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1939645 |
End bp | 1941921 |
Gene Length | 2277 bp |
Protein Length | 758 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | (p)ppGpp synthetase I, SpoT/RelA |
Protein accession | YP_003386458 |
Protein GI | 284036528 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.495196 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.405077 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGAATG CCATCGAGCA TCAAGCCAAT AATACAAGCG AACCCGTTAT TGACCTGGAA CTGGAGCGAC AGGAAATCCT GAAGCGCTAT CGCCGGTTGT TACGGGCCGC CAAACCTATG CTGAAAGGTG ATGACGCCAA GCTGATCAAG AAAGCGTTCA ACACCTCTGC CGAAGCCCAT AAGAATATGC GACGGCGATC GGGCGAACCG TATATCTATC ATCCGCTCGC CGTTGCCCAG ATTGCCGTTG AAGAAATAGG ACTGGGAACA ACCAGTATTG TAGCCGCCCT TCTGCATGAT GTTGTTGAAG ATACGGATAC AACCATTGCC GATATTGACC GGGCATTCGG ACCCAAGGTG GCCAAAATAA TTGATGGACT GACCAAAATT TCCGGCTTCT TCGAATATGG AACCTCTCAG CAGGCCGAGA ATTTCCGCAA GATGCTTCTG ACGCTGTCGG ACGATGTACG GGTTATTCTG ATCAAACTTG CCGACCGGTT GCACAACATG CGAACGCTGG ACTCCATGCC CCGCGATAAG CAGTTGAAGA TCGCTTCCGA AACGATTTAT ATCTACGCTC CGCTGGCTCA CCGGCTGGGT TTGTACACCA TTAAGTCGGA GCTGGAAGAC CTGTATCTGA AGCATGTGGA GCCCGAAGCG TATAAAGACA TCGCGAAAAA GCTACGCGAA ACACGGCTGG CACGGGATCG GTTTATCGGT CGGTTTATCG AACCTATTGA AAAAGATCTG GCCGAAACGG GCATCAAATA CATTATTAAA GGCCGTCCAA AGTCGATTTA TTCCATTTGG ACCAAACTGA ACAAATCGAA AAAACCGTTC GAGGAAATTT ATGATCTGTT TGCCGTCCGG ATTATTCTGG ACGTACCTCA GGAGGAGGAA AAAGCCGCCT GCTGGCGAGC CTATTCCATC GTAACGGACC ATTACAAACC TAACCCCGAC CGGCTGAAGG ACTGGATCAG CACCCCGCGA ACCAACGGGT ACGAGTCGCT GCACACCACT GTTATGAGCC GGTTAGGTCA GTGGGTTGAG GTGCAGATTC GGACTGAGCG GATGAACGAA ATTGCCGAGA AAGGATACGC AGCCCACTGG AAATATAAAG GTAACGATAC CCAGACTGGC GCGGGCATTG AAGCCTGGAT AAGTCAGGTG CGGGATATGA TCGAGTCGGC GGGTAGTGGC GACAAAAAAG CTGCGATTGA GTTCGTCGAT GATTTTCGAA GCAATCTGTA CAGCGAGGAG GTTTTTGTGT TTACGCCCAA AGGCGACCTC CAGGTACTGC AACGGGGGGC CACCGCGCTC GATTTTGCCT TCGACATTCA CACCCAGATT GGGGCACGCT GTATGGCTGC CAAAGTCAAT AATACCCTCG TGCCGCTGAG TTATGTGCTG CAAAATGGCG ATCAGGTGGA AGTGATCACC TCCAACCGGC AGAAACCCAG TGAGGACTGG CTTCGGTTTG TGGTTACGTC GAAAGCCCGG ACCAAGATCA AAGATTTGAT CAAGGAAGAG AACAAACGAT TCGTGACCGA CGGCCGCGAG CTGGTAAACA AAAAACTCCG GGTGCTGCGC ATGGAGATGA CCAACGAAGT CATCAACCAG CTTCGCGCTT ATTTCGGCTC CAAAACCACC GACGACTTCT TCTACCGCAT TGGGAAAGGC CACATTGACG TTGGTGAACT GAAGAAGTTC AAATCGGATA AGGAAGCCAA AGAGAACCGG GCGAATAAAC TGAATACCGA TGCGCTGCCC GATGCCAAGG CGTTTGTTAA AGAACTGAAG AAAATCCACG GCGAACGGGC CGATGCCGAC ATGCTCCTGA TTGGTGAGGA CATGGACAAA ATCGATTATA CCCTTTCAAA ATGCTGCAAC CCGATCTCGG GCGACGACGT TTTTGGGTTC GTGACCATCA ATGACGGCAT TAAAATTCAC CGGGTTACCT GCCCTAACGC CGTTGAGCTG ATGTCGAACC ACGGCAACCG GATTATCAAA GCAAAATGGA CCTCCCAAAA AGAGCTTGCC TTCCTGGCTG GTCTGCGTAT TACCGGTACG GACCGGGTTG GCTTGATCAA TGATGTAACG CGGGTGATCA GCAATGAGCT GCATATTAAC ATGCGCTCTG TGGCGATTGA CTCGAAAGAC GGTATCTTTG AGGGAAATAT TCGGCTCTAC GTTCACGATA CGAGCCACCT CGAAATCCTG ATGCAGAAAC TCGAACGCGT TCAGGGTGTC TTTGAAGTGG TTCGGTTTGA TTCTTAA
|
Protein sequence | MMNAIEHQAN NTSEPVIDLE LERQEILKRY RRLLRAAKPM LKGDDAKLIK KAFNTSAEAH KNMRRRSGEP YIYHPLAVAQ IAVEEIGLGT TSIVAALLHD VVEDTDTTIA DIDRAFGPKV AKIIDGLTKI SGFFEYGTSQ QAENFRKMLL TLSDDVRVIL IKLADRLHNM RTLDSMPRDK QLKIASETIY IYAPLAHRLG LYTIKSELED LYLKHVEPEA YKDIAKKLRE TRLARDRFIG RFIEPIEKDL AETGIKYIIK GRPKSIYSIW TKLNKSKKPF EEIYDLFAVR IILDVPQEEE KAACWRAYSI VTDHYKPNPD RLKDWISTPR TNGYESLHTT VMSRLGQWVE VQIRTERMNE IAEKGYAAHW KYKGNDTQTG AGIEAWISQV RDMIESAGSG DKKAAIEFVD DFRSNLYSEE VFVFTPKGDL QVLQRGATAL DFAFDIHTQI GARCMAAKVN NTLVPLSYVL QNGDQVEVIT SNRQKPSEDW LRFVVTSKAR TKIKDLIKEE NKRFVTDGRE LVNKKLRVLR MEMTNEVINQ LRAYFGSKTT DDFFYRIGKG HIDVGELKKF KSDKEAKENR ANKLNTDALP DAKAFVKELK KIHGERADAD MLLIGEDMDK IDYTLSKCCN PISGDDVFGF VTINDGIKIH RVTCPNAVEL MSNHGNRIIK AKWTSQKELA FLAGLRITGT DRVGLINDVT RVISNELHIN MRSVAIDSKD GIFEGNIRLY VHDTSHLEIL MQKLERVQGV FEVVRFDS
|
| |