Gene Slin_1596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1596 
Symbol 
ID8725330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1924366 
End bp1924950 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content47% 
IMG OID 
Productprotein of unknown function DUF820 
Protein accessionYP_003386443 
Protein GI284036513 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.550261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGG AATTTCCGGT CGTGCTTAAG AAATTGGAGG TGATGACGGA CGACGAGTTT 
TTCGCGTTCT GCCGCGCTAA TGATTCCCTT GAATTAGAAC GTGATAAAAA CGGAAATATA
ATAATTGTGT CACCCACCGG CTCAAAAACA GGTTTACGTA ATGTTACGCT TATTGGCGAA
GTATATGCCT GGAATAAATA TTACGAACTA GGCTATCTAT TCGATTCGTC TACAGGCTTC
AAACTCCCCA ATGGAGCTAC CCGCTCACCG GATGTTGCCT GGATTCAAAA AGATCGCTGG
GAGGCAATTC CTGAAGAACA GCAGGAGAAA TTTGCACCTA TTTGCCCGGA TTTCATCATT
GAGCTTCGTT CAGCCAGTGA TGACCTGAAC TACCTTCAGG CCAAAATGGA CGAATACCGC
TCAACAGGCT GCCGACTTGG CTGGCTGATT GATCGGAAAA CCCAGCAGGT GATCATTTAT
CGCCCCGGTC AGCCCACCGA AACCATCCCT TCTTTCAACC AGATTCTCTC CGGAGAAGAA
GTTCTTCCTG GTTTTACGTT CGATCTGACG TTGTTGATGC GTTAG
 
Protein sequence
MELEFPVVLK KLEVMTDDEF FAFCRANDSL ELERDKNGNI IIVSPTGSKT GLRNVTLIGE 
VYAWNKYYEL GYLFDSSTGF KLPNGATRSP DVAWIQKDRW EAIPEEQQEK FAPICPDFII
ELRSASDDLN YLQAKMDEYR STGCRLGWLI DRKTQQVIIY RPGQPTETIP SFNQILSGEE
VLPGFTFDLT LLMR