Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1581 |
Symbol | |
ID | 8725315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1909120 |
End bp | 1909863 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | protein of unknown function DUF159 |
Protein accession | YP_003386429 |
Protein GI | 284036499 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0117565 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0972934 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTTTTC ATAAATCGCT CAATGTCAAA GCAGAGGAGC TGGAGGCTCG TTATGAGGCT GTGTTACCAC CAACGGCTAA CTTTCAGCCC GTTTATCACG CCAATGCGTA TAATTTCCCT GTCTGGCCGA TTGTTACACG GCAGGAGCCG GGAAAATTGC AACTGATTCA TTGGGGACTT ATTCCGCGCT GGGCGCGAAC GAAAGAGGAT GCGACTGATA TCCGCACCAA AACGATCAAC GCCCGCTCCG AAACCATTTA TGAAAAACCT TCATTTAAAT CGGCGGCACA GGCGGGCAAA CGCTGCCTGA TTCCGGTAAC CGGCTTTTTT GAGTGGTATA CACAAGGAAG TAAGAAGTAT CCATTCTACA TTTATTCCAG CGATCAGAAA ATTAGCTCTA TTGCGGGTTT ATGGGACGAA TGGCCCGACC CTGAAACAGG CGAACTGGTG CCAACTTATA CGCTCCTCAC CACAGAGGCT AACCCGCTTC TGGCCGCGAT ACACAATACC AAAAAGCGAA TGCCGTGTGT CCTGACTCCC GACGCCGAAC ATGCCTGGCT GCACGATGAT CTGTCCGAAA AAGACACGTT GGCGTTGCTG GAAAAACCTT ACCCGGCCAG TAAAATGCAT AGCTACAGCA TTAGTAAACG GATCACATCC AGAAGCGAAC CCAGCGATGT TCCGGAAGTG CTGACACGTA CCGATTACCC GGAATTAAGT AGTAATCCTC AGTTGTTTAG CTAG
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Protein sequence | MCFHKSLNVK AEELEARYEA VLPPTANFQP VYHANAYNFP VWPIVTRQEP GKLQLIHWGL IPRWARTKED ATDIRTKTIN ARSETIYEKP SFKSAAQAGK RCLIPVTGFF EWYTQGSKKY PFYIYSSDQK ISSIAGLWDE WPDPETGELV PTYTLLTTEA NPLLAAIHNT KKRMPCVLTP DAEHAWLHDD LSEKDTLALL EKPYPASKMH SYSISKRITS RSEPSDVPEV LTRTDYPELS SNPQLFS
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