| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1570 |
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| Symbol | |
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| ID | 8725304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 1891543 |
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| End bp | 1894608 |
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| Gene Length | 3066 bp |
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| Protein Length | 1021 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | glycosyl hydrolase BNR repeat-containing protein |
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| Protein accession | YP_003386418 |
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| Protein GI | 284036488 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.371729 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTATT TCGCCTTTTA CTTTCTGGCA ATTAGTTGCA GTCTGGTACT CAGCAACCCG
CTTTGGGCTC AGCCAGCAAC GAAGCCCGAT ACGGCCATCA ACCCCGTTTT TAAAGGCATG
GCCTGGCGCA ACATCGGCCC AACCCGGGGT GGCCGGTCGC TGGGGTCTGC GGGGTCGCCG
AGCCGCAAAC AGGAATATTA TTTCGGAGCC GTTGGCGGTG GCTTATGGAA AACTACCGAT
GGCGGCCAAA GCTGGGCACC CGTTACGGAT GGTCAGTTGA CAAGTTCGTC TGTAGGGGCC
GTTGCGGTTG CTGAATCCAA TCCCGATGTG GTCTATATCG GTACAGGCGA AACACAGCTT
CGCGGTAACA TCATGCAGGG CGATGGAGTG TACAAATCGA CCAATGCCGG GAAAACCTGG
ACCAACATTG GGTTGAGAAA CACCCAGGCC ATTGCCCGTG TCAGGATTCA CCCCACCAAC
CCTGATATTG TTTACGTGGC TGCTCTGGGA CACCCCTACG GCCCTAACGA AGAGCGGGGC
ATTTTCCGGA CCACCGATGG CGGTAAATCC TGGAAGAAAG TCCTCTACAA AAGCGATAAG
GCCGGTGGTA TCGACCTGAT CATCGACCGA ACCAATCCCA ATGTACTCTA TGCCTCTCTC
TGGCAGGTGT ACCGCAAACC CTGGAAAATG TGGGGGGGCG GGGGTGACTC CGGCCTGTTC
AAATCGACGG ACGGGGGCGA AACCTGGACC GAGCTGACCC GTAAACCAGG CATGCCTAAA
GGAACCGTCG GTAAAATTGG CGTGACCGTT TCGCCCGTCG ACCCCAACCG GGTGTGGGCC
ATCGTCGAGG CCGAAGACGG GGGCGTATAC CGCTCCGACG ACGCCGGGAT GACCTGGAAA
CACGTCAACG ACGAGCGCAA GCTTCGCCAG CGGGCGTTTT ATTACTCCCG AATTTATGCT
GATCCCCTCG ACAAAAACGG CGTTTACTGC CTGAATGTCG ACTTTTTCAA ATCGTCGGAT
GGTGGGGTAA AGTTCAATAA ATCGTTAAAA GTACCGCACG GCGATAACCA CGACTTGTGG
ATCGACCCGG CCGATTCGAC CCGAATGATT ACGTCCAATG ACGGCGGTGC GGCTGTTTCG
GTCAACGGCG GTAAAACCTG GACGGATGAA AACTTCCCGA CCGCGCAACT TTATCACATT
ACAGCTACCA ACGATTTCCC CTACCATGTA GCCGGTGCCC AACAGGACAA CACCACCGTA
GCCGTAGCCA GCGAAGGCTG GGGGAATCAG ATGGCCCGCA GTAATTCCAT CAAAAAGAGC
GAATGGACTT ACGAAGTGGG TGGTGGCGAA AGCGGCTACA TTGCCCAGGA CCCCAAGAAC
CCGAACATCT TTTACGCGGG CAGCCAGGGT GCATTACTTA CCCGCTACGA CCGCACGACG
GGCCAAACCC GCGATGTGCA GGTGTACCCG CGTTTCTTCT CCGGCGAACC CGCCAGTGCT
CTGCCCGAAC GCTGGCAGTG GACGTACCCG ATTGTTTTTT CGCCCAAAGA CCCGAACCGG
CTTTACGTTT GTTCACAGCA CGTATGGGTA TCGACCAACG AGGGACAAAG CTGGGATAAA
ATCAGCCCCG ACCTTACCCT GGCCGACACG GCTACGCTGG GGAAAAGCGG TGGTGTCATT
ACGATGGACA TGAACGGCCC GGAGATTTAC GCGACCGTTT TTGCACTGGC TCCCTCCTAC
CACGACGTGA ACACCATCTG GGCGGGCTCC GACGACGGGC TGATTCACAT CACCCGCGAC
CACGGCAAGA GCTGGCAGAA AATCACCCCG CCGGATATGC CCAAACATAC CCGCGTGAGT
ATTATCGAAG CGTCGCGGCA CAAACCCGGC ACGGCCTATG TAGCGGCCAA ACGCTACCAG
ATGGACGACC GCACGCCCTA TCTCTGGAAA ACGGATGATT ACGGGAAGAC CTGGAAAAAG
ATCATTACTG GATTACGTGC GGACGATTAC GCCCATGCCA TTCGCGAAGA CATCACGCGT
CCCGGCCTGC TCTACGCCGG TATGGAACAT GGCGTTTGGG TTTCCTTCAA CGACGGCGAG
AACTGGCAGC CCATGCAACT GAAACTGCCC GATACCCAAA TCTCAGACAT TCAGGTAACG
GAGAAAGACA TTGTCATTGG TACGCACGGC CGGTCGATCT ACGTGCTGGA CGATGTAGCT
CCCGTTCGGG AGTTTACGCC CGATCTGGCC AAGAAGGCTG TTCACCTCTT CAAGCCCTAC
TATGCTGTTC GTCGGGTACA GCCAGCCGTC TTCCAGTACT ATCTGGCGAA GAAAGCGGAC
AGTGTGAAAA TTGAGATTCT TAATGCCGCC GGAACGCTGA TTCAGTCGTT TACGGGCAAC
AAACCCTCTT ACCCTAAAGA TGATGAGGAT GACGACGATT CAGGGAAACC CAAAATCAAA
CTACCCACCA CGGCCGCTGG TCTGAACCGC TACGAGTGGG ACCTGCGCTA CCCCGGTGCC
ACTTATTTCA AAGGGATGAT CATGTGGGGA GCCCGGCCTA CGTCCGGACC ACTGGCGTTG
CCCGGTCAGT ATCAAGTGCG GTTAACCGTA GGCGATCAAA CGTTCACTCA ACCCTTCGAG
ATTAAGCTTG ACCCACGACT GAAGGGCGTC TCCCAAGCCG ATGTGCAGGA GCAATTCAAG
ATGGCGATGA AACTGCGGGA CGAGACGAGC AAAGCCAACG ACGCGGTGAT TCAGATTCGG
GCGGTGAAGG AGAAGCTGGC CAAACAACCC GACAGCCCTA CCAATAAAAA GCTGAAAGAG
CAGTTGAACA TCATCGAAGA AAACCTCTAT CAGATTCGGA ATCAAAGTGG TCAGGACCCG
CTGAACTTCC CGATCAAGCT CAACAACCGG CTGGCGGCTC TCTGGCGCAG CATTGAATCC
GGCGATGCCA AACCGACCAA CGGCTCTTAC AAAGTTTACG AGGAACTCAC CGCCGACCTA
AACAAGCAAC TAGCCGAACT GGATACGCTG CTCAAAACGA AAACGGCAAA AAATATTGGT
ATGTGA
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| Protein sequence | MKYFAFYFLA ISCSLVLSNP LWAQPATKPD TAINPVFKGM AWRNIGPTRG GRSLGSAGSP
SRKQEYYFGA VGGGLWKTTD GGQSWAPVTD GQLTSSSVGA VAVAESNPDV VYIGTGETQL
RGNIMQGDGV YKSTNAGKTW TNIGLRNTQA IARVRIHPTN PDIVYVAALG HPYGPNEERG
IFRTTDGGKS WKKVLYKSDK AGGIDLIIDR TNPNVLYASL WQVYRKPWKM WGGGGDSGLF
KSTDGGETWT ELTRKPGMPK GTVGKIGVTV SPVDPNRVWA IVEAEDGGVY RSDDAGMTWK
HVNDERKLRQ RAFYYSRIYA DPLDKNGVYC LNVDFFKSSD GGVKFNKSLK VPHGDNHDLW
IDPADSTRMI TSNDGGAAVS VNGGKTWTDE NFPTAQLYHI TATNDFPYHV AGAQQDNTTV
AVASEGWGNQ MARSNSIKKS EWTYEVGGGE SGYIAQDPKN PNIFYAGSQG ALLTRYDRTT
GQTRDVQVYP RFFSGEPASA LPERWQWTYP IVFSPKDPNR LYVCSQHVWV STNEGQSWDK
ISPDLTLADT ATLGKSGGVI TMDMNGPEIY ATVFALAPSY HDVNTIWAGS DDGLIHITRD
HGKSWQKITP PDMPKHTRVS IIEASRHKPG TAYVAAKRYQ MDDRTPYLWK TDDYGKTWKK
IITGLRADDY AHAIREDITR PGLLYAGMEH GVWVSFNDGE NWQPMQLKLP DTQISDIQVT
EKDIVIGTHG RSIYVLDDVA PVREFTPDLA KKAVHLFKPY YAVRRVQPAV FQYYLAKKAD
SVKIEILNAA GTLIQSFTGN KPSYPKDDED DDDSGKPKIK LPTTAAGLNR YEWDLRYPGA
TYFKGMIMWG ARPTSGPLAL PGQYQVRLTV GDQTFTQPFE IKLDPRLKGV SQADVQEQFK
MAMKLRDETS KANDAVIQIR AVKEKLAKQP DSPTNKKLKE QLNIIEENLY QIRNQSGQDP
LNFPIKLNNR LAALWRSIES GDAKPTNGSY KVYEELTADL NKQLAELDTL LKTKTAKNIG
M
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