| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1569 |
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| Symbol | |
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| ID | 8725303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 1888211 |
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| End bp | 1891402 |
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| Gene Length | 3192 bp |
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| Protein Length | 1063 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | glycosyl hydrolase, BNR repeat-containing protein |
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| Protein accession | YP_003386417 |
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| Protein GI | 284036487 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.870361 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAAAC GACTACCCTA TCCCTTCCTT TGCCTGCTAG CTCTCCTGAG CAGCGTAGTA
ACGCAGGCCC AAACGACTCC AGCGGCTATT GACCCCACTC AGGCATCCAT CATGAAAGCC
ATGCAATGGC GCAATATTGG TCCCTTCCGG GGAGGGCGTT CCGTTTGTGT AGCGGGGCAC
CCCACCGAGC GACTCGTGTT TTACATGGGC ACTACCGGCG GAGGTGCGTG GAAAACAGAG
AATGGCGGCA TCACCTGGCA GAATATTTCG GATGGATTCT TCAAGACCGG TTCTGTTGGT
GCCATTGCCG TGTCGAAATC AAATCCCAAC ATCTTGTATG TGGGCATGGG TGAGCATACG
CTACGAGGCA ATCTCTCGCA TGGTGATGGA GTCTATAAGT CGACCGATGC GGGGAAGACA
TGGAAACATA TCGGTTTGGC CGATACCTAC CACATTGGTC AGGTGATCAT CGACCCCACC
AATCCGGATG TTGTGTACGT AGCGGCTTTG GGTCATGCCT TTGGTCCTAA TGAAGAACGG
GGTATTTTCC GGACGCAGGA CGGCGGTAAA AGCTGGAAGA AAGTTCTCTA CAAAAACCCG
AATGTTGGTG CCATTGACCT TACCATCGAC CCGGCGAATC CTAAAACGCT GTATGCCTCT
ACCTTCGAAT TCCGCCGGTT TCCGTGGGGC GTTCGCAGTG CCGGGCCGGG AGCGGGCATC
CACAAATCGA TGGACGGGGG TGACACCTGG ACCGATATTA CCCGAAACAC CGGACTGCCC
ACGGGCACCA ACCGGGGCCG CATCGGACTG GCCCTTTCGC CATCCAAACC CGACCGCATC
TGGGCCATTA TCGAAGCCGA GAATGAACAG ACGGGCGTGT ACCGCACCGA CGATGCCGGG
AAAACCTGGC AGCTTGTCAG CCAGTTTGCC GACTTGTTTC AACGCCCCTG GTACTACCAT
CACCTCGCGG CCGACCCCAA AGACAGCGAG ACCATCTGGG TGCTAAACAT CGACATGTGG
AAATCGAAAG ATGGCGGCAA AACTTACAAA AAAGTGGACC CGCCCCACGG CGACAACCAC
CAGCTCTGGA TTGACCCCAA CGACACCAAC CGAATGGTAC AGGCCAACGA CGGGGGCGGT
ACGGTCACCT TCGACGGCGG CAAATCGTGG TCCAGCATTT ATAACCAGCC CACGGCCCAG
ATGTACCACG TCATCACGGA CAACAAATTT CCGTATCGGG TGTATGGCGC TCAGCAGGAT
AATTCGACCA TTTCGGTACC CAGCCGCTCG GATTACGGGG CCATTTACCC CGACCAGAAC
TTCGACGTGG GCGGGGGCGA ATCTGGTTAT ATCGCCTTCG ACAAGAATGA CCCGTCACTC
ATCTTCGCGG CCAATCACCA CTGGCTCACC CGCCTGGACC TGAAAACGAA TCAGCTCAAA
GATGTGTCGG TGATTCCGGA TGATATGTAC GGTTACGGAT CGGCAGACCT GGCCTACCGC
TTTCAGTGGA CGTATCCGGT CGTCACCTCG CCACACAACC CGAAAGTGCT GTACGCTACT
TCCCAGTATG TACACCGGTC TACGGATCAG GGTGCTAGCT GGCAGGTGAT CAGCCCCAAC
CTGTCGCGCT CCGACCCGGC CACGTTGGAG AAAACCCCGA CAATGGACGA CCAGTCGATT
GGGAAAGACT GGGGACCCAT CAAACGTGAC AATACAGGCG TAGAATGGTA CGGGACCATT
TTCGCCCTGG CCGAATCGCC GGTAAAAGCG GGAGTTTTAT GGTCGGGTTC CGACGATGGT
TACGTTCAAC TTTCGACCGA TAATGGCAAA ACCTGGAAGA ACGTCACGCC GAAAGCCATG
CCCGACTTCG CCCGGATCAG CATCATCGAG CCTTCTCCAC ACGACCCGGC AACGGCCTAT
GTGGCGGCTC TAAAATACAA ACAGGACGAC TTCCACCCCT ACCTCTACAA GACCAGTGAT
TACGGTAAAA CGTGGACCAA AATCACCCAG GGTATCCCGG AGGATGAGTT CACCCGCGTG
ATTCGGGAAG ACCCCAAACG GCGCGGCCTG TTGTATGCCG GAACCGAAAA AGGTATGTAT
GTATCGTTCA ATGATGGTGC CCGCTGGCAA CCGCTTCAAC TGAATCTGCC GGTGGTGCCG
ATTCACGATC TAGCCATTCA GGATAACGAT CTGGTGGCGG CTACCCATGG ACGGTCCTTC
TGGATTCTGG ACGACCTGAC GGTTCTTCAC CAACTGACGG ACGAGGTGCA GAAATCGGCG
GTTCATTTAT TCAAGCCCCG GCCAACGGTC CGCTTCAAGG CGGGTCTGGA CCCGGCCATC
AAACCCGTAC CCAGCGGAGC CGATGAACTG GGTAAGAATC CGCCGAATGG CGTGAAGGTC
GTTTATTACC TGAAAGAGAA ACCCAAAGGG CCGATCTCAC TAGCCTTTCT CGATGCCAGC
GGTCAGCTGA TTAAATCCTA TAAAAGTGCC TTGCCAGTGT CCACTTCAGC TTCGACATCG
AAAGACTCAT CAGCACGCTC TGAGATGCGC CAACCGACAC CACCCGCCCG CCGGGAAACC
CTGCTGCCTG CCGAGGTTGG CGGTAATTCA TTCGTTTGGG AAGACATGCG CTACCCAGAT
CCGATTTCGT TGCCGAATTC CGTTACCCAC GGCCGGGCAA AGGGGCCATT GGCGATGCCG
GGTAACTACA AAGTTCAGTT GACGGTGGAT GGCAAAACGT ACACGCAGAC GTTCGATATC
ATCAAAGACC CGCGCATCGA AACGACACCG GAGGAGTTTA AACAACAGTT CGATATGCTC
ATCAACATTC GCGAGCGAAT TAACGAGCTT CGGAACGGGG TGTTAACGAT CCGTAAACTC
CGCCAGCAAC TGGACAGCGC CAGCCACTCC CCCAACGACC CGACGGTTAT TGAACTGAAG
GACAAACTGT TGCGCATTGA AGATGCGCTG TACCAGTTCC GGGCCAAAGC CAATCAGGAT
CTAACGAACC ACCCCGTTCG ATTAAACACT AAATTTACGG CCCTGGGCGG CTTCGTTGAA
TCGGACGATT CGAAACCGAC TCAGCAGCAA AAAGATCAGT ACAACAGCCT GTCGAAAACG
CTGGACGAAC AACTAAAATC CCTGGAAAAC CTCAAACCAA CGATTCAAAG TAAAATCAGA
CCGAATGGTT GA
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| Protein sequence | MLKRLPYPFL CLLALLSSVV TQAQTTPAAI DPTQASIMKA MQWRNIGPFR GGRSVCVAGH
PTERLVFYMG TTGGGAWKTE NGGITWQNIS DGFFKTGSVG AIAVSKSNPN ILYVGMGEHT
LRGNLSHGDG VYKSTDAGKT WKHIGLADTY HIGQVIIDPT NPDVVYVAAL GHAFGPNEER
GIFRTQDGGK SWKKVLYKNP NVGAIDLTID PANPKTLYAS TFEFRRFPWG VRSAGPGAGI
HKSMDGGDTW TDITRNTGLP TGTNRGRIGL ALSPSKPDRI WAIIEAENEQ TGVYRTDDAG
KTWQLVSQFA DLFQRPWYYH HLAADPKDSE TIWVLNIDMW KSKDGGKTYK KVDPPHGDNH
QLWIDPNDTN RMVQANDGGG TVTFDGGKSW SSIYNQPTAQ MYHVITDNKF PYRVYGAQQD
NSTISVPSRS DYGAIYPDQN FDVGGGESGY IAFDKNDPSL IFAANHHWLT RLDLKTNQLK
DVSVIPDDMY GYGSADLAYR FQWTYPVVTS PHNPKVLYAT SQYVHRSTDQ GASWQVISPN
LSRSDPATLE KTPTMDDQSI GKDWGPIKRD NTGVEWYGTI FALAESPVKA GVLWSGSDDG
YVQLSTDNGK TWKNVTPKAM PDFARISIIE PSPHDPATAY VAALKYKQDD FHPYLYKTSD
YGKTWTKITQ GIPEDEFTRV IREDPKRRGL LYAGTEKGMY VSFNDGARWQ PLQLNLPVVP
IHDLAIQDND LVAATHGRSF WILDDLTVLH QLTDEVQKSA VHLFKPRPTV RFKAGLDPAI
KPVPSGADEL GKNPPNGVKV VYYLKEKPKG PISLAFLDAS GQLIKSYKSA LPVSTSASTS
KDSSARSEMR QPTPPARRET LLPAEVGGNS FVWEDMRYPD PISLPNSVTH GRAKGPLAMP
GNYKVQLTVD GKTYTQTFDI IKDPRIETTP EEFKQQFDML INIRERINEL RNGVLTIRKL
RQQLDSASHS PNDPTVIELK DKLLRIEDAL YQFRAKANQD LTNHPVRLNT KFTALGGFVE
SDDSKPTQQQ KDQYNSLSKT LDEQLKSLEN LKPTIQSKIR PNG
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