Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1503 |
Symbol | |
ID | 8725237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1817715 |
End bp | 1819028 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
Protein accession | YP_003386352 |
Protein GI | 284036422 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0873558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACGG TAAGCCTGTT TCAATTCCTA ATCTCCGTTA TTCTCTACAG CTGCCACCAG ACGGAGAAGG CTACCCCGGC AACCCTTCCT CTTACGCTGG TTGACGGTTA TGGACCGTTC AATCCGGGTT TTTCGAAATT AGGTAATGAG CGTCAAACTA ACCCGGATGC TCAAGAGCCA TGGCGTAAAA TGTGCCTGAA TGTGAGGGGA ATCCCGGCCG ATTGGAGCAA TGTCGATAAG GCAATGATTT GGCTGAACAC CAACCAGCTC GTTTATCAGA ATTTCATTCA GGGAACGTTT ACAAAATCGC AGTACAACGA ATGTCGGAAA TACTGGAAAT TGACGGCGGA TACCAGCCAA CTTTCCAGAA AACCAATTAA ATGCTACGTC TATACGCTAA GAGGATTCGA TGAACAAGCG GGTAAATGGG CCGTACTGAT TGACACGAAC AATAACCTTG ACTTCAGTGA CGAAACAGCT TTTTACCCCG AAGTTATTCA GGGTAACAAT CCATACTCAT ACAAGAAGCT TACGCTTGTC AACTACGAAA TTTACCGGAA AGGAAAGATT CTAAAGGCAT CCTTACCAAT GTTGGTAAAG ACATTCGGGA GTGATTTTTT TTACAATTTT CCGCAGTACG CTCAAGCTAC ACTCAAACAT GGCGGCAATA CGTACAATCT GGCGGTTAGT TTTGGTTTCA CCAGACCCGA CTTTGACATT ATTGGCCTTG CTGACTTATC GTCCTTATAC AAAAATGAGC GTCTTTCTGA AGACAAATTG ATTGAGATCA ATGAAAACGT ACGCCTGGAT GGAATTACCT ATAAAAACAA AGGCGTTGAT TTCTACAACA ATGTGTTACG GTTAGACCCC GTCATTGACG ACAAGAAAGA ATACTCGCTA CAGGTTGGCT ATCCGTTCAG GCCCTTTGCT GAGCAGGAAT TTACATCCAG ACGTCCCATC GCTCTGGCGG ATTTTAAAGG CAAGTATGTG TACGTCGACT TCTGGGGAAC CTGGTGCAAG GGGTGCGTTG ACGATATTCC AAATCTAAAA AAGCTGTATG CGGGGCTTGA CAAAAACCGG TTCGAATTTA TCGGCATCGT TCAGGACTCG CCGGAACGGC TGACTAAGTT TATTAAAAAA CAGGATGTAC AATGGCCGCA AATCCTGTCC GACGAAGCCA ACAAACTTGT TGAATCCTAC CCGTTTACGG GCTACCCTAC ATCCGTACTT CTCGACAAAA ACGGCCTTGT TCTGGCCAGA GACCTGCGGG GAAATGAACT GAGAGACAAA CTAAAGGAGT TGAGTGCAGA GTGA
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Protein sequence | MKTVSLFQFL ISVILYSCHQ TEKATPATLP LTLVDGYGPF NPGFSKLGNE RQTNPDAQEP WRKMCLNVRG IPADWSNVDK AMIWLNTNQL VYQNFIQGTF TKSQYNECRK YWKLTADTSQ LSRKPIKCYV YTLRGFDEQA GKWAVLIDTN NNLDFSDETA FYPEVIQGNN PYSYKKLTLV NYEIYRKGKI LKASLPMLVK TFGSDFFYNF PQYAQATLKH GGNTYNLAVS FGFTRPDFDI IGLADLSSLY KNERLSEDKL IEINENVRLD GITYKNKGVD FYNNVLRLDP VIDDKKEYSL QVGYPFRPFA EQEFTSRRPI ALADFKGKYV YVDFWGTWCK GCVDDIPNLK KLYAGLDKNR FEFIGIVQDS PERLTKFIKK QDVQWPQILS DEANKLVESY PFTGYPTSVL LDKNGLVLAR DLRGNELRDK LKELSAE
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