Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1494 |
Symbol | |
ID | 8725228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1808928 |
End bp | 1810172 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | L-fucose transporter |
Protein accession | YP_003386343 |
Protein GI | 284036413 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.289824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGCAA CCCCTACCGC AGGCCAGTCA AAAGCGGCCT TTACTGAAAA CAAGTACCTT GTTACCCTCG TCTTTGTTAC ATCACTTTTC ATGTTTTGGG GGGTCGCCAT TACGATGGGC GATGTGTTGA ACAAGCACTT CCAGCATGTG CTGAGCCTGA CTAAAACACA ATCGGCTTTT GTTCAGTTTG CCATTTTCGG AGCCTACTTC GTTATGGGTA TCCCGGCGGG ACTGTTCATG AAGCGGTTCG GTTATAAAAA CGGAGTATTG CTTGGTCTGG GCCTTTTCGC TACCGGTTCG TTTCTGTTTG TTCCGGCTGC TGCCGCTGCT TCGTTCACGT ATTTCGGTAT TGCTCTCTTT ATTTTAGGCT GCGGTATCTC GACCCTCGAA ACGGTAGCCC ACCCCTTTGT GGCCTCCCTC GGCGACCAGC GGACCAGCGA CCAGCGTATC AACTTTGCTC AGGCATTTAA TGCGCTGGGT GCCATTATCG GCCCCGCCAT CGGCTCGTAT TTCCTGCTGC GTAACAACAC GCCGGGCAGT ACCGATCTTA CCTCGGTAAA AACCCTGTAC ATTGCCATTG GCAGTGTCAT TGCTACGATT GCCATTCTTT TCTCGTTTGT AAAAGTACCC GCTTTAACAG ATCCTCACGC TACCGTTGCC GATCCTGACG CGGCCAATGT TGATGTAGCC CCCGGCAAAT CGCTCTTTGA GCATAAACAC TTCCGTTGGG CGGTTGCTGC CCAGTTTTTC AACGTAGCCG CACAGGGCGG TACATGGGCG TTTTTTATTA ATTACGGTCA CGAGAAGATG GGTTTCTCCG ATGCAGTGGC CGGTAACTAC ATGGTGCTAT TCATGGGCCT GATGCTGGCC GGACGGTTTG TGGGTACCTT CCTGATGCGC GTCATTGCGC CCCATACCTT GCTGGCCATT TTTGCGGGTT GTAACATCCT CATGTGCCTT ATCATTACAC AGAGTTTGGG CTGGCCGTCG TTCATCGCGC TCATGATGCT CAATTTCTTC TTCAGCATTA TGTTTCCGAC CATCTTCAGC CTGGGCCTTA AAAACCTGGG TTCGCATACC CAACAGGCGT CTTCATTCAT TTCGATGGGT GTTGTTGGCG GGGCCGTGTT CCCGTTCCTG ATGGGTATGG CCGCTGAACA CGATGTGGCA AACGCCTATT ATTTGCCTAT TATCTGCTAC GCCGTTATCC TCCTGTTTGG GGCTAAGTTC TACAAGGTGA GGTAG
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Protein sequence | MQATPTAGQS KAAFTENKYL VTLVFVTSLF MFWGVAITMG DVLNKHFQHV LSLTKTQSAF VQFAIFGAYF VMGIPAGLFM KRFGYKNGVL LGLGLFATGS FLFVPAAAAA SFTYFGIALF ILGCGISTLE TVAHPFVASL GDQRTSDQRI NFAQAFNALG AIIGPAIGSY FLLRNNTPGS TDLTSVKTLY IAIGSVIATI AILFSFVKVP ALTDPHATVA DPDAANVDVA PGKSLFEHKH FRWAVAAQFF NVAAQGGTWA FFINYGHEKM GFSDAVAGNY MVLFMGLMLA GRFVGTFLMR VIAPHTLLAI FAGCNILMCL IITQSLGWPS FIALMMLNFF FSIMFPTIFS LGLKNLGSHT QQASSFISMG VVGGAVFPFL MGMAAEHDVA NAYYLPIICY AVILLFGAKF YKVR
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