Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1475 |
Symbol | |
ID | 8725209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1786412 |
End bp | 1787815 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | TPR repeat-containing protein |
Protein accession | YP_003386324 |
Protein GI | 284036394 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.260545 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCAAG AGTTCGAAGA ACGAGAAGGC GATATTAAAG AATCTATCCG GCGTTTTGAG CAGATGCTGG ACCAGCAGCA AAGCCAGTTT TTCGACCTGG ACGTCTATGA ACAAATGGTT GAGCACTACC TCAATCAGGG TGATTTAGAC AAGGCGCTTA AAGCCGCCGA ATCCGGTCTG GAAAACTTTC CCTATGCCCT GGAATTAATG CTTGACAAAG CCCAGATTAT GGCCAATTTC CAACGGTTCG ATGAGTCGCT GGATTTACTG GAACGGGCTT CCTTATTTAA CCCCGGCGAC CTCGATGTTC CTTTCATGCA GGGCTCTGTC CTGAATATGG CCGGTCGGTA CGAAGAATCA ATCCAGGTGC TGGAAGAACT GCTCGATCGG GCTGAAGAGA AGGACGATAT TTTGTTTCAA CTGGGCCAGA GCTATCAGAA CTGGGGTAAA TACGACGAGG CTATCACGCA ATACAAGAAG TCCATTGCGC TGAATATCAA TAACGAAAAT GCACTGTATG AGCTTGCGTT CTGTCTGGAT GTAACGGGTG AACTGGAAAA TAGTCTGGCT TACTACCAGC AGCTAATCGA TTCCGATCCT TACTCATACA ACGCCTGGTA CAACATTGGT ATCGCTTACA GCAAACTTGG GCGCTACGCC GAAGCCGCTG AAGCGTACGA TTATGCCGTT ATCATCAAAG GTGATTTTGC ATCGGCGCAT TTCAATCTGG GCAACACCTA CATGAATCTG GGGTTGTTCG AGAAAGCCGA AAGCTGTTAC CGCGAAACGC TGAAGTACGA AGAAGCCACC GCCGATACGT ATTGTCACTT GGGTGCCAGC CTGGAAAAGC AGGATCGTAT AACGGAGGCC ATTAAAGAAT ATCGGGAGGC TATCAAACTG GACCCCATGT GGGACGAAGC TTGGTATGGT ATCGGTGTGT GCCTGAGCGA ATCGGGTAAG TGGTACGAAG CGCTGCCATT TTTGCAGAAA GCAGTTAAAC TAAGCGATCA GAACGGCGAG TACTATCTGG CCGTAGCCGA AACGGAGTAC AAAATCGGGA ATGTACTGTC GAGTGTCGAG GCTTTCGAGA AAGCTGCCGA AGTTGATGCC GCGAACCCCG ATGTGTACCT GACCTGGTCA CTCGTTCCGT TCGATCAGGG CGATTTTCTG AAAGCTAACG ATATTATCCA GTCGGGAATC AACGATATGC CTGCCGAAGC GGATCTGTAC TACCGCTCTG CCGTCTATCT GATTCATGCT GGTCACTACC GCGAATCGCT GATTCAGCTG GAAGCGGCTC TCTCGCTGGA TTATGACGCG CACGTGCAGC TTTTTGAGTT TTTCCCCGAA CTGGAAAAAC AGAAGGCACT CTATAAAATC ATTCAGCAGT ACAAAAAAGA GTAA
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Protein sequence | MEQEFEEREG DIKESIRRFE QMLDQQQSQF FDLDVYEQMV EHYLNQGDLD KALKAAESGL ENFPYALELM LDKAQIMANF QRFDESLDLL ERASLFNPGD LDVPFMQGSV LNMAGRYEES IQVLEELLDR AEEKDDILFQ LGQSYQNWGK YDEAITQYKK SIALNINNEN ALYELAFCLD VTGELENSLA YYQQLIDSDP YSYNAWYNIG IAYSKLGRYA EAAEAYDYAV IIKGDFASAH FNLGNTYMNL GLFEKAESCY RETLKYEEAT ADTYCHLGAS LEKQDRITEA IKEYREAIKL DPMWDEAWYG IGVCLSESGK WYEALPFLQK AVKLSDQNGE YYLAVAETEY KIGNVLSSVE AFEKAAEVDA ANPDVYLTWS LVPFDQGDFL KANDIIQSGI NDMPAEADLY YRSAVYLIHA GHYRESLIQL EAALSLDYDA HVQLFEFFPE LEKQKALYKI IQQYKKE
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