Gene Slin_1451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1451 
Symbol 
ID8725185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1761361 
End bp1763478 
Gene Length2118 bp 
Protein Length705 aa 
Translation table11 
GC content53% 
IMG OID 
Productferrous iron transport protein B 
Protein accessionYP_003386300 
Protein GI284036370 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0248254 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0823674 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAATCGT CTCCCACCAT TGCCCTCGTT GGCAATCCCA ATGCCGGTAA GTCGTCTTTA 
TTTAACCAGT TGACCGGCCT GCGTCAGAAA ACGGGTAATT TCCCCGGTGT CACGATGGAC
AAGAAATCCG GGACGTGGCC CATTGATGCC CAGCATACAG CTACCGTAAT TGACCTGCCC
GGCGTTTATT CTATTTATCC AAAGTCGTTG GATGAACAGA TCGTAACGGA TATTCTGGCT
AATCCTGCCC ACCCAGACTA CCCCGATGTA TCGGTTGTTG TGGTCGATGC CTCCAATCTT
CATCGAAATC TGCTGCTTTT TACGCAGGTC GCCGATTTGG GGGTGCCAAC GGTGCTGGCC
CTTAACATGC TCGATGTAGC GCAGCAGCAA AGTAAAGTGG TTAACTCGGT ACGCCTGGCC
ATGAGTCTGG GCGTTCCCGT TGTTCGTATC AATGCCCGAA CGGGCGAAGG CACCGATCTG
CTGAAAAAGG CGGTTCTGGG TCAGATGCAG GAACCTGTTC TCCCCGGAAA ACTTTTCTTC
GACCCCGTTG ACGACGTGCC TGATTTGATT TCCGACACTA AAACGCAGTA TAAGCTTACC
AACAATTACC TCGCGTTACA GTACATCATC CAGCATGACG GGTTTTCATT CCTGAATACA
CCCCAGCGGA AAGTGCTCGA CGAGATAATC GAAAAGCACA AGTTCAGTGA ACCCACCTTC
CAGGCGGGCG AAACCATTAC CCGATATAAG CGAATTGCGG CTATTGTAAC GGAGGTGGTG
AGCGATCAGC GTCCGGTCAA CGAGCCAACC TGGAGCCAGA AACTGGATCG GGTGTTGCTG
CATCCGGTTT GGGGCTACGC TATTTTCGGC TTCGTCCTGC TCCTGATTTT TCAGGCCATT
TTCGCCTGGG CGCAACCCTT TATGGACGCC ATCGACTCGG GTGTTGCCTG GCTTAACAGC
CAGCTCAAAG AAAGCTTACC CGCTGGCCCA CTTACCGATT TGCTTACCGA TGGTATTCTG
GCTGGGTTGG GCGGCATTCT GGTGTTTATT CCGCAAATAG CCTTTCTGTT TCTGCTGATT
GCCCTGCTGG AGGAGTCGGG ATACATGTCG AGGGTGATGG TCATTATGGA CCGGATCATG
CGCAAATTCG GCCTGAATGG CCGGAGTGTG GTTCCGCTTA TTTCCGGTGT GGCCTGCGCA
GTTCCTGCTA TTATGGCTAC CCGTAGCATC GGCACCCGGC GCGACCGGCT CATTACTATA
TTGGTAACTC CGCTGATGAG CTGCTCAGCC CGATTGCCTA TTTATACCAT CCTCATTGCG
CTGGTTGTAC CAAGCCAGCG TGTGCTAGGC GTATTTAACC TTCAGGGGCT AGCCTTAATG
GGCTTGTACC TGTTGGGGTT AGTGAGTGCC TTACTGGCGG CCTATGTCCT GAAAATCCTG
CTTCGAACCA AAGAGCGGGG GTACTTCATC ATGGAACTGC CAACCTTCAA ACTACCCCGC
TGGAATCATG TCGGGTTAAC CGTTTGGGAG AGTGTCCGGT CGTTCGTGTG GGAAGCTGGG
CGGGTTATTT TAGCCATTTC CATTGTATTG TGGGTCGTAG CCAGTTATGG CCCCGGCAAC
GATATGGATG AGGCCGAAGC ACGGGTGAAG CAGCAGAATC CAACAGCCGC ATCTGATGAC
CTCCAAGATC GAATCGCTTC CGAGCGCCTG GAGGCATCTT ACGCCGGAAA CTTCGGCCAT
TTTATCGAAC CCGTCATTCG CCCCCTTGGC TACGACTGGA AAATTGGTAT CGCATTGCTA
AGTTCATTTG CTGCCCGAGA AGTATTTGTC GGAACCATGT CGACAATTTA CAGCATTGGC
AGTGGGGCCG ATGAGGAAGG GGTAACCATT CGGGAGCGAC TTCGGCAGGA GCGAAACCCG
GAAACAGGCG GGGCTATGTA TACACCCGCT CTGGCCTGGT CGTTGCTGAT CTTCTACGTG
TTTGCCATGA TGTGTATGAG TACACTCGCA GCTACCCAAC GGGAAACTAA AAGCTGGAAG
TGGCCAGCCG TTCAGTTGGT GTACATGATG GCGCTGGCCT ATGTAACTGC CTTCGCCACG
TACCAACTTC TGAAATGA
 
Protein sequence
MKSSPTIALV GNPNAGKSSL FNQLTGLRQK TGNFPGVTMD KKSGTWPIDA QHTATVIDLP 
GVYSIYPKSL DEQIVTDILA NPAHPDYPDV SVVVVDASNL HRNLLLFTQV ADLGVPTVLA
LNMLDVAQQQ SKVVNSVRLA MSLGVPVVRI NARTGEGTDL LKKAVLGQMQ EPVLPGKLFF
DPVDDVPDLI SDTKTQYKLT NNYLALQYII QHDGFSFLNT PQRKVLDEII EKHKFSEPTF
QAGETITRYK RIAAIVTEVV SDQRPVNEPT WSQKLDRVLL HPVWGYAIFG FVLLLIFQAI
FAWAQPFMDA IDSGVAWLNS QLKESLPAGP LTDLLTDGIL AGLGGILVFI PQIAFLFLLI
ALLEESGYMS RVMVIMDRIM RKFGLNGRSV VPLISGVACA VPAIMATRSI GTRRDRLITI
LVTPLMSCSA RLPIYTILIA LVVPSQRVLG VFNLQGLALM GLYLLGLVSA LLAAYVLKIL
LRTKERGYFI MELPTFKLPR WNHVGLTVWE SVRSFVWEAG RVILAISIVL WVVASYGPGN
DMDEAEARVK QQNPTAASDD LQDRIASERL EASYAGNFGH FIEPVIRPLG YDWKIGIALL
SSFAAREVFV GTMSTIYSIG SGADEEGVTI RERLRQERNP ETGGAMYTPA LAWSLLIFYV
FAMMCMSTLA ATQRETKSWK WPAVQLVYMM ALAYVTAFAT YQLLK