Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1420 |
Symbol | |
ID | 8725154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1726687 |
End bp | 1728279 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | glycoside hydrolase family 43 |
Protein accession | YP_003386269 |
Protein GI | 284036339 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.394008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.931127 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTATTA GTAAAGGACT ACATAAGAAA GCACTGCTTT GGGCTGGTTT AATGGTCGTG TTGCTACAAA CACAAAATAG GGTAGTTGCG CAAACAGCCA CGAACCCGGT CATTTTCGCT GACGTGCCCG ACATGGCCAT GATTCGGGTG GGCAACACTT ACTACATGAG CAGCACGACT ATGCACCTGA GTCCGGGGCT GCCCATCATG AAGTCGAACG ACCTGATCAA CTGGAAGATG GTGGGGTACG CTTACGATAC GCTGACGACA GCGGACGCGA TGAGCCTGAC CAACGGCAAA AGCACCTACG GGCGCGGGTC GTGGGCCAGT AGCCTGCGCT ACCTCAACGG CCTGTATTAC GTGACCACCT TTGCGCAGAC CAGCGGCAGA ACCCACATCT ACACCACCAA AGACATCGAA AAAGGACCGT GGAAGGCCGT TTCATTCAAA CCGTCGTACC ATGACCACAG CCTGTTTTTC GACGACGACG GCCGAACGTA TCTAATCTAC GGCGCGGGCA AACTCCGGCT GGTTGAACTG AACACCGATG CGTCGGGGGT GAAACCCGGC ACCACGGAGC AGGTCATCAT CGAGAACGCC AGCACACCCT CAGGAACCGG CGGTGGCCTG CCTGCAGAAG GGTCGCAACT GTTTAAAGTA AAGGGTAAAT ATTATCTGTT CAACATCAGC TGGCCCCGGG GCGGTATGCG TACGGTGATT ATTCACCGGG CCGACAAGAT CACCGGTCCC TGGGAAGGCC GCGTGGCCTT GCAGGACCTG GGTGTGGCAC AGGGTGGACT CATCGACACG CCCGACGGCC GCTGGTTTGC CTACCTGTTC CGCGATTTCG GCGGGGTGGG CCGGATTCCA TATTTGGTAC CCGTCGAGTG GAAAGACGGC TGGCCGGTGC TGGGCGTCAA TGGCAAAGTG CCCGAAACCC TCGATCTCCC CGCCAGCAAA GGCTTAATTC CCGGCATTGT CAACTCCGAC GAATTCACCC GCAAAAAAGG CGACCCCGCC CTGCCGCTAG TCTGGCAGTG GAATCACAAC CCCGACAACG CCCTGTGGTC GGTTTCGGAG CGAAAAGGAT TTCTGCGCCT GAAAACCGGA CGAACCGACA CCTCGTTTGT GATGGCCCGC AACACGCTTA CACAGCGTAC TATCGGCCCC GAATGTACCG GGTCTACCCT ACTCGATGCG TCGAACATGA AAGACGGCGA TTTTGCCGGT CTGAGCCTGT TGCAAAAGAA TTACGGGCTG GTGGGAGTGA AAGTCGAAAA TGGAAGCCGG TCGATTGTCA TGGTGAGTGC CAGTTCGGGC AAGCCGGTAG AGATACAGCG CGTTCCGTTG AGCCAGAAAA TGGTCTACCT GAAAGCGGAG TGTGATTTCA ACGACCGTAA AGACACCGCC CATTTCTTCT ACAGCCTCGA CGGAAAAGCG TGGAGCCCCA TTGGGGAACC GCTGAAAATG CCGTACACCA TCCCGCACTT CATGGGCTAT CGGTTCGGGC TGTTCAACTA CGCCACCTTG CAAACGGGCG GTTTTGCCGA CTTCGATTAT TTCCGGATTA CCAACACAAT CTCCGGGCAA TAA
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Protein sequence | MIISKGLHKK ALLWAGLMVV LLQTQNRVVA QTATNPVIFA DVPDMAMIRV GNTYYMSSTT MHLSPGLPIM KSNDLINWKM VGYAYDTLTT ADAMSLTNGK STYGRGSWAS SLRYLNGLYY VTTFAQTSGR THIYTTKDIE KGPWKAVSFK PSYHDHSLFF DDDGRTYLIY GAGKLRLVEL NTDASGVKPG TTEQVIIENA STPSGTGGGL PAEGSQLFKV KGKYYLFNIS WPRGGMRTVI IHRADKITGP WEGRVALQDL GVAQGGLIDT PDGRWFAYLF RDFGGVGRIP YLVPVEWKDG WPVLGVNGKV PETLDLPASK GLIPGIVNSD EFTRKKGDPA LPLVWQWNHN PDNALWSVSE RKGFLRLKTG RTDTSFVMAR NTLTQRTIGP ECTGSTLLDA SNMKDGDFAG LSLLQKNYGL VGVKVENGSR SIVMVSASSG KPVEIQRVPL SQKMVYLKAE CDFNDRKDTA HFFYSLDGKA WSPIGEPLKM PYTIPHFMGY RFGLFNYATL QTGGFADFDY FRITNTISGQ
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