Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1393 |
Symbol | |
ID | 8725127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1693450 |
End bp | 1694541 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | aminoglycoside phosphotransferase |
Protein accession | YP_003386242 |
Protein GI | 284036312 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.330539 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAATG ATTTTCTTAT GATTAGTCCT GATTTACCCC GTTCGGTTCG TTCGGGCGAA GAACTTGATT TACCAAAGCT GAACGACTTC CTTCAGGCCA ATGTGCCGGA GGTAGGCACC GTGGCCGCCG TTCAGCAGTT TTCGGGTGGG TTCTCCAATC TTACTTATTT GCTTCAAACG GCCGACCAGG CCTATGTGCT GCGTCGGCCG CCGTTTGGAG CTACCATCAA AGGGGGGCAC GACATGGGGC GGGAGTTTCG GGTATTATCG CTTTTGCAGA GCCACTACGA TAAAGTACCC CGACCGGTGG TCTATTGTGA GACCGATGAT GTGCTGGGGG CACCGTTTTA TATCATGACC CGGATAACGG GTGTGATTCT GCGGGCGTCG ATGGCACCAA CGCTGAGCCT CGCTCCTGAG CGCATGCGGC AACTGTCTGA AGCGCTGGTT GACAACCTCG TGACCATCCA CAATCTTGAC ATAAGCAAAA CGGGACTTAA TCAATTAGGC AAGCCTGAGG GCTATGTGCA GCGGCAAGTA GAGGGATGGA TAAAGCGGTA CCAAAATGCC GAAACGGATA AAATCCCGGC TATGGACACC ACCGCTGACT GGCTTCGGCG CAACTATCCC GGCGATCAGG CTCCCGCCTT TTTGCACAAC GATTACAAAT TCGATAACGT CCTCTTCGCG TCCGATGAAG CTACGGGTGA ACCCTTATCG GAAATAAAAG GGGTACTGGA TTGGGAGATG GCTACCGTTG GCGACCCGCT CATGGATTTG GGCGCTATGC TGGCCTATTG GTCTGAAGCG GATGATAGTC CGGCCTACAG AAACTTCAAC CTGACCTGGC TTCCAGGTAA TCTGACCCGA CAGGAGGTGG TGCGTCGCTA CGCTGAGAAA AGCGGTCGTG ATTTGAGTGA AATCCTATTT TACTATGTGT TCGGGCTTTA TAAAAACGCC GTGATTGCCC AGCAGATTTA CGCCCGCTGG AAACAGGGGC ATAGTAAGGA TGCGCGTTTT GGCCATCTAT TGCCCATGAT CATTGAACTG GCAACGAAGG CCGCTAATGC TATCGAAACG GGCTTGCTGT AG
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Protein sequence | MQNDFLMISP DLPRSVRSGE ELDLPKLNDF LQANVPEVGT VAAVQQFSGG FSNLTYLLQT ADQAYVLRRP PFGATIKGGH DMGREFRVLS LLQSHYDKVP RPVVYCETDD VLGAPFYIMT RITGVILRAS MAPTLSLAPE RMRQLSEALV DNLVTIHNLD ISKTGLNQLG KPEGYVQRQV EGWIKRYQNA ETDKIPAMDT TADWLRRNYP GDQAPAFLHN DYKFDNVLFA SDEATGEPLS EIKGVLDWEM ATVGDPLMDL GAMLAYWSEA DDSPAYRNFN LTWLPGNLTR QEVVRRYAEK SGRDLSEILF YYVFGLYKNA VIAQQIYARW KQGHSKDARF GHLLPMIIEL ATKAANAIET GLL
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