Gene Slin_1393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1393 
Symbol 
ID8725127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1693450 
End bp1694541 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content53% 
IMG OID 
Productaminoglycoside phosphotransferase 
Protein accessionYP_003386242 
Protein GI284036312 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.330539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAATG ATTTTCTTAT GATTAGTCCT GATTTACCCC GTTCGGTTCG TTCGGGCGAA 
GAACTTGATT TACCAAAGCT GAACGACTTC CTTCAGGCCA ATGTGCCGGA GGTAGGCACC
GTGGCCGCCG TTCAGCAGTT TTCGGGTGGG TTCTCCAATC TTACTTATTT GCTTCAAACG
GCCGACCAGG CCTATGTGCT GCGTCGGCCG CCGTTTGGAG CTACCATCAA AGGGGGGCAC
GACATGGGGC GGGAGTTTCG GGTATTATCG CTTTTGCAGA GCCACTACGA TAAAGTACCC
CGACCGGTGG TCTATTGTGA GACCGATGAT GTGCTGGGGG CACCGTTTTA TATCATGACC
CGGATAACGG GTGTGATTCT GCGGGCGTCG ATGGCACCAA CGCTGAGCCT CGCTCCTGAG
CGCATGCGGC AACTGTCTGA AGCGCTGGTT GACAACCTCG TGACCATCCA CAATCTTGAC
ATAAGCAAAA CGGGACTTAA TCAATTAGGC AAGCCTGAGG GCTATGTGCA GCGGCAAGTA
GAGGGATGGA TAAAGCGGTA CCAAAATGCC GAAACGGATA AAATCCCGGC TATGGACACC
ACCGCTGACT GGCTTCGGCG CAACTATCCC GGCGATCAGG CTCCCGCCTT TTTGCACAAC
GATTACAAAT TCGATAACGT CCTCTTCGCG TCCGATGAAG CTACGGGTGA ACCCTTATCG
GAAATAAAAG GGGTACTGGA TTGGGAGATG GCTACCGTTG GCGACCCGCT CATGGATTTG
GGCGCTATGC TGGCCTATTG GTCTGAAGCG GATGATAGTC CGGCCTACAG AAACTTCAAC
CTGACCTGGC TTCCAGGTAA TCTGACCCGA CAGGAGGTGG TGCGTCGCTA CGCTGAGAAA
AGCGGTCGTG ATTTGAGTGA AATCCTATTT TACTATGTGT TCGGGCTTTA TAAAAACGCC
GTGATTGCCC AGCAGATTTA CGCCCGCTGG AAACAGGGGC ATAGTAAGGA TGCGCGTTTT
GGCCATCTAT TGCCCATGAT CATTGAACTG GCAACGAAGG CCGCTAATGC TATCGAAACG
GGCTTGCTGT AG
 
Protein sequence
MQNDFLMISP DLPRSVRSGE ELDLPKLNDF LQANVPEVGT VAAVQQFSGG FSNLTYLLQT 
ADQAYVLRRP PFGATIKGGH DMGREFRVLS LLQSHYDKVP RPVVYCETDD VLGAPFYIMT
RITGVILRAS MAPTLSLAPE RMRQLSEALV DNLVTIHNLD ISKTGLNQLG KPEGYVQRQV
EGWIKRYQNA ETDKIPAMDT TADWLRRNYP GDQAPAFLHN DYKFDNVLFA SDEATGEPLS
EIKGVLDWEM ATVGDPLMDL GAMLAYWSEA DDSPAYRNFN LTWLPGNLTR QEVVRRYAEK
SGRDLSEILF YYVFGLYKNA VIAQQIYARW KQGHSKDARF GHLLPMIIEL ATKAANAIET
GLL