Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1383 |
Symbol | |
ID | 8725116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1682417 |
End bp | 1683880 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003386232 |
Protein GI | 284036302 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.229216 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.586845 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAAAG AAAAAAAGAG GTACGCAGAG GTAGTAGCTC AACTTATACA CACTAACGTA TTTTTTGTTT TTTGTTTATC GTTTTGGCTA AGCCTTTTTG TTGTTTCCTG CCGTCCGTCG AGTAACCGTC TGAATCCTAA AGCGCCTAAA GAAGTCTATA ACACTACCAA AATGGAAGTC CAGAACGAAC GGTTTTTGTC GACGGCTCAC GTACCGGTTT CTATTGCACT GAGTGATATT GAACACCAGA TCAATACACA GGTCAGCGGG TTGATTTACG AAGACAACAG CCTGACGGAT AACGGCAACG ATCAATTCAT GACGAAAGTC TGGAAGCGGG GCACCATTCT GGTTAGCGCG CAGGATAGCT TGTTTCATTT CACCGTGCCC CTGCGCATCT GGGTTAAAGC GGGTGTTTCG GTACTGGGTT TTACGCAGTA TAAAGAGACG GAATTTGAGA TCGACTTGCG GTTTAAAACA AAATTCGACC TCGACCGCGA CTGGTCCGTC AATACCCATA CTGAAGCGGA TGGGTATGGC TGGGTAAAGC GGCCAACCAT TGGTTTCGTG GGCCTGAATA TCCCCATTAC TAATTTCGTG GGGCGGATGA TCGACAAAAA TCTGGGTAGT ATCACCAAAA CACTCGATCA GCAGGTACGG CGGAATATAG ACCTTCGGAC GCCCGTGCTG AAAGCCTGGA ATCTTCTTCG CGAGCCGTAT CTGCTTTCCG ACAAATACCG TACGTATTTA CAGGTGGTGC CCAAGCGGGT ACTCATTACG CCCCTCCGGT TTGAAGGCCA GGTCATTCGC TCAACAATCG GTATAGAGGG CTACGCCCTA ACCACCACCG GAGCAAAACC CGCCGTCAAA CCAGCCGTAT CGTTACCCGA TTTGACGGTG GTTCCGCAGG TGAAAGATGA TTTTCAGATC GGTTTGCTGA GTGAGGCCAC GTATCAGGAA GCGGCTAAAC TAGCCGCTGA TGAGTTTGTC GGGAAGTCGT TTTCGTTCAG CGAGAATCGT TATTCGATCA CCGTCACGAG CATGGATATG TACGGTCAGA ACGATAACCT CATTATCAAA GCGGGACTGA AAGGAACCAT CAACGGAGAT ATTTACCTGA GTGGACGGCC TTACTACGAC CCCCGCGACC AGACTATCTC GCTGAAAGAC CTAAAGTACG ATCTGGATAC GCGAAATATT TTGCAGCAGT CAGCCAGCTG GCTACTGAAA GGTACGTTTG CCCGTACCCT CGAAAAACAA CTGACCATTC CGGTAGGGAG CCAACTGGCA GATATGCAGA AACAGATTCA GGAACAGTTG AAAAATAATC AGGTCATCAA AGGTGTGGTC ATCAATGGTC GGCTCGACGA CATAAAACCA GATCAGGTTT ATCTGACTCC CACCGCCATG CTGGCCGTAG TAAACGTCCG TGGCCGCGTG GAGGTAAAGG TTGAGGGGTT ATAG
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Protein sequence | MHKEKKRYAE VVAQLIHTNV FFVFCLSFWL SLFVVSCRPS SNRLNPKAPK EVYNTTKMEV QNERFLSTAH VPVSIALSDI EHQINTQVSG LIYEDNSLTD NGNDQFMTKV WKRGTILVSA QDSLFHFTVP LRIWVKAGVS VLGFTQYKET EFEIDLRFKT KFDLDRDWSV NTHTEADGYG WVKRPTIGFV GLNIPITNFV GRMIDKNLGS ITKTLDQQVR RNIDLRTPVL KAWNLLREPY LLSDKYRTYL QVVPKRVLIT PLRFEGQVIR STIGIEGYAL TTTGAKPAVK PAVSLPDLTV VPQVKDDFQI GLLSEATYQE AAKLAADEFV GKSFSFSENR YSITVTSMDM YGQNDNLIIK AGLKGTINGD IYLSGRPYYD PRDQTISLKD LKYDLDTRNI LQQSASWLLK GTFARTLEKQ LTIPVGSQLA DMQKQIQEQL KNNQVIKGVV INGRLDDIKP DQVYLTPTAM LAVVNVRGRV EVKVEGL
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