| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1366 |
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| Symbol | |
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| ID | 8725099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 1658869 |
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| End bp | 1660905 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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| Protein accession | YP_003386215 |
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| Protein GI | 284036285 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAAATT CGCTGCTTTC TTCATCATCA ACCCCTGCAA GTAGTACGCC GGAAGGGGCT
GGTTCACCTG TTCTTTATAC GCCTTCACTC ACGCAGTATG TTCGCCGGAA AACCAGTACG
GTTACCATCG GCGATGTACC TATGGGCTCC GATTATCCAA TTCGTGTCCA GTCGATGACG
ACGGTCGACA CAATGGATAC CAAAGGCTCT GTTGAGCAGA CCATCAGGAT GATTGAAGCG
GGGTGTGAGT ATGTTCGTAT TACAGCACCC AGCGTTAAAG AGGCACAAAA TTTGGAGAAT
ATCCGCAAAG AACTCCGGGC ACGCGGTTAT ACCACTCCCC TGGTTGCCGA TATCCATTTC
ACACCCAATG CCGCCGAATT GGCCGCCCGG ATCGTAGAGA AGGTCCGTAT CAATCCCGGC
AACTACGCCG ACCGGAAGCG CTTCGAATTC ATTGATTATA CAGATGCCGC CTACGCAGCC
GAACTGGAAC GTATTCGGGA TAAATTTCTG CCGCTGGTTC GTATCTGTAA AGAATACGGT
ACGGCTATGC GTATCGGTAC CAATCACGGC TCCTTATCCG ATCGTATTCT GAGTCGTTAC
GGCGATACAC CCGTAGGTAT GGTTGAATCG GCCCTGGAGT TCTTACGCAT CTGCGAGGCC
GAAAACTATT ACAACATTAC GTTGTCGATG AAGTCGAGCA ATCCGCAGGT GATGGTACAG
GCCTATCGGT TGCTGGTTCA GCGTCTGGAC GAGGAAGGTC TGAAACCCTA TCCCCTACAC
CTCGGCGTGA CAGAAGCCGG TGAAGCCGAA GATGGCCGCA TCAAGTCTGC ACTGGGCATT
GGTACCCTGC TTGAAGATGG TATTGGTGAC ACCGTTCGGG TTTCGCTTAC CGAAGAGCCG
GAACGGGAAG CCCCGGTAGC CAAAGCATTG ATTGACCGAT ACACCAACCG GGCGGCTACC
AGCCAGCCTA TTCCGGCTAT TACCACCTAT CCGATCAATC CATTTCAATA CAGTCGACGG
TTAACCCATG AGGTGGCCAA CATTGGCGGT CAGAATGTAC CCCGCGTCAT TGCCGATTAC
AGCCGGGTGC CCGTAACGGA ACACAAAAAC CTGCACCCGA TTGGTCATTT TTACCTGCCC
GAACCTGATA AGTGGCGCAT GAATGATCTG GGCGCCGACT ATATATATAC GGGCTCCTAC
CCGGCACAGT TCATGTTGCC CAACGGCCTC AAAGAAATTC TTGATTATAC CGTCTGGCAG
ACTGGTACCG ATCAGACGAA TGTCTTTCCC TTGCTCACCA CGGTCGAATA TCTGGCAGCC
CGGGCAGCGC AAAGCGAACT CCATCCTCGC CTGAATTTCG TTCGGGTTTC GCTACCGGCT
TCATCCGATG AACTGTTTAC TACACTTAAG GCAGATACAA CGGTAGTCCT ATTGATCTCG
ACTGACAACG CGCACGCGAT GCCCGAGTTA CGTCGGTTGG TCGTTGAATT GATTAATCGC
GGTATTACCG CTCCCGTTAT TATTAACAGA GGGTATCCAG CCGTTTCGGA AGAAGAGGTT
CCCCTTTACG CGTCTACCGA CGTTGGCGGT TTGCTCATCG ATGGACTTGG CGATGGCATT
ATGCTGTCGG CACCACAGGC AAATCCTTCC GACGCCGATC TGAAACGACT CAACAACCTG
TCATTTGGCA TTTTGCAGGC CGCCCGTACC CGTATTACCA AAACGGAATA TATATCCTGT
CCATCCTGCG GCCGGACGCT GTTCGACCTA CAGGAAACAA CGGCCCTTAT TCGTCAACGT
ACCGACCACC TGAAAGGGGT TAAAATTGGC ATTATGGGTT GTATTGTAAA TGGCCCGGGC
GAAATGGCCG ACGCTGACTA CGGTTATGTA GGCATTGGTC GTGATAAGAT TGCCCTGTAT
CGGGGACAGC AGGTCATCAA AAAATCCGTT CCGGCCGACC GTGCCGTCGA TGAATTGATC
GAGCTAATCC GGGAAGACAA CCGCTGGCTG GAGCCCACGT TCGAAAATGC CATTTAA
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| Protein sequence | MLNSLLSSSS TPASSTPEGA GSPVLYTPSL TQYVRRKTST VTIGDVPMGS DYPIRVQSMT
TVDTMDTKGS VEQTIRMIEA GCEYVRITAP SVKEAQNLEN IRKELRARGY TTPLVADIHF
TPNAAELAAR IVEKVRINPG NYADRKRFEF IDYTDAAYAA ELERIRDKFL PLVRICKEYG
TAMRIGTNHG SLSDRILSRY GDTPVGMVES ALEFLRICEA ENYYNITLSM KSSNPQVMVQ
AYRLLVQRLD EEGLKPYPLH LGVTEAGEAE DGRIKSALGI GTLLEDGIGD TVRVSLTEEP
EREAPVAKAL IDRYTNRAAT SQPIPAITTY PINPFQYSRR LTHEVANIGG QNVPRVIADY
SRVPVTEHKN LHPIGHFYLP EPDKWRMNDL GADYIYTGSY PAQFMLPNGL KEILDYTVWQ
TGTDQTNVFP LLTTVEYLAA RAAQSELHPR LNFVRVSLPA SSDELFTTLK ADTTVVLLIS
TDNAHAMPEL RRLVVELINR GITAPVIINR GYPAVSEEEV PLYASTDVGG LLIDGLGDGI
MLSAPQANPS DADLKRLNNL SFGILQAART RITKTEYISC PSCGRTLFDL QETTALIRQR
TDHLKGVKIG IMGCIVNGPG EMADADYGYV GIGRDKIALY RGQQVIKKSV PADRAVDELI
ELIREDNRWL EPTFENAI
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