| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1332 |
|---|
| Symbol | |
|---|
| ID | 8725065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 1627570 |
|---|
| End bp | 1629210 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | peptidase U62 modulator of DNA gyrase |
|---|
| Protein accession | YP_003386181 |
|---|
| Protein GI | 284036251 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.357045 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0644884 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGTC GAGATTTCAA CCAACTTATA GGCATGGGTG CTGCGGGCAT CCTGCTACCC
TCACTTCCCG CCTTTTCCCG AACCGTTAGC CCCGAAGCTC TGCTGGAAGC GGGAATCGAC
GTGGCCGTGA AGAAACGCCT GGCCGATGCC GCCCTGAACG CGGCCAAGAG TAAAGGTGCC
AGCTACACCG ATGTGCGCAT TGGCCGCTAC CTGAACCAGT TCGTGATCAC CCGCGAAGAC
AAAGTACAGA ACATTGTCAA TACCGAATCC TACGGCGTTG GTGTTCGGGT AATTGCCGAT
GGCTGCTGGG GATTTGCTGC CGTTGTCGAT GCCAAAAACG AAGCCGATAT GGCCAAAGCC
GCCGAGAAAG CAGTAGCCAT CGCCAAAGCC AACGCCCGGC TCATGAAAGA GCCGGTTCAG
CTGGCTCCTC AGAAAGGCTA CGGTGAAGTA TCGTGGAAAG CTCCTATCAA GCGTAATGCC
TTTGAAGTGC CCATTAAAGA AAAGGTTGAC CTTCTTCTGT CGGTCAACAG CGCGGCTCTG
CAAAACGGAG CCAACTACGT GAACTCCGTC ATGTTTATGG TGAACGAGCA AAAATATTTT
GCTTCCAGCG ACGGCACCTA CGCCGATCAG GATATTCACC GCATCTGGCC CAACTTCACC
GTAACGGCCA TCGATCCCAA AACGGGCAAG TTTGAGACAC GCAACACCCT TAGCTCGCCG
ATGGGGATGG GCTACGAATA CCTGCAAGTT AATCCGGCCG ATAAAGTAAC GGGCATCACC
ACCCGCTACA ACAAAGGCTA CGACATGCTG GAAGATGTAA CAGCAGCTGC TAAGCAGGCT
CGCGCCAAAC ACGCGGCCAA GTCGGTCGAA GCGGGTAAAT ATGACCTCGT CCTCGACCCG
TCGCACCTGT GGCTGACCAT CCACGAATCA GTTGGCCACC CGCTGGAACT GGACCGCGTA
CTGGGCTACG AAGCTAACTT CGCGGGTACC AGTTTCGCTA CCCTCGACAA ATGGCAGTCG
AAGAACTTTA ATTACGGTAG CAAACAGGTC AACCTCATCG CCGATAAAAC CCAGGTTGGG
TCGCTGGGTG CCGTTGGATA CGATGACGAA GGGGTGAAAA CCAAGCAGTG GGATCTGGTA
AAAGACGGTA CGCTGGTAAA TTACCAGGCC ATCCGCGATC AGGTTCACAT CATTGGCGAA
AAAGAATCGC AGGGCTGCTG CTACGCCGAT AGCTGGAGTT CCGTCCAGTT TCAGCGCATG
GCCAACGTAT CGCTGGCGGC TGGCAAAACA CCTTTGTCTG TACAGGAAAT GATTAAAGAT
GTCAAAAAAG GCATTTACAT CATCGGCGAC GGATCGTTCT CCATTGACCA GCAGCGGTAC
AACTTCCAGT TTGGCGGGCA GTTGTTCTAC GAAATCAAGG ACGGACAAAT TGCCGGTATG
CTGAAAGATG TGGCTTACCA GTCCAACACC CAAGAATTCT GGAACTCCTG CGCACAGGTT
TGCGACGAAC GCGATTACCG GCTCGGCGGC TCCTTTTTCG ACGGCAAAGG GCAGCCCTCC
CAGTCGAGTG CTGTCTCGCA CGGCAGCAGC ACCGCCCGTT TCAACGGCGT CAATGTGATC
AATACGGCAA GAAAGATCTA A
|
|---|
| Protein sequence | MNRRDFNQLI GMGAAGILLP SLPAFSRTVS PEALLEAGID VAVKKRLADA ALNAAKSKGA
SYTDVRIGRY LNQFVITRED KVQNIVNTES YGVGVRVIAD GCWGFAAVVD AKNEADMAKA
AEKAVAIAKA NARLMKEPVQ LAPQKGYGEV SWKAPIKRNA FEVPIKEKVD LLLSVNSAAL
QNGANYVNSV MFMVNEQKYF ASSDGTYADQ DIHRIWPNFT VTAIDPKTGK FETRNTLSSP
MGMGYEYLQV NPADKVTGIT TRYNKGYDML EDVTAAAKQA RAKHAAKSVE AGKYDLVLDP
SHLWLTIHES VGHPLELDRV LGYEANFAGT SFATLDKWQS KNFNYGSKQV NLIADKTQVG
SLGAVGYDDE GVKTKQWDLV KDGTLVNYQA IRDQVHIIGE KESQGCCYAD SWSSVQFQRM
ANVSLAAGKT PLSVQEMIKD VKKGIYIIGD GSFSIDQQRY NFQFGGQLFY EIKDGQIAGM
LKDVAYQSNT QEFWNSCAQV CDERDYRLGG SFFDGKGQPS QSSAVSHGSS TARFNGVNVI
NTARKI
|
|---|
| |