Gene Slin_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1278 
Symbol 
ID8725011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1565560 
End bp1567602 
Gene Length2043 bp 
Protein Length680 aa 
Translation table11 
GC content51% 
IMG OID 
ProductNeprilysin 
Protein accessionYP_003386127 
Protein GI284036197 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.402647 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAACT ATAAAAACCT CGTTTACGTC TCTCTAACAG TGTTGCTGGC AGGAGCCTGT 
CAGCGGGCAG CTACGCCAAC GACAACTATT CCAACAACAA AACGCGTTGT CATAACGGGC
ATTGACGCAT CTAAAAAACC CGGCGATGAC TTCTTTAAAT ACGCTAACGG CATCTGGAAC
GATACTGCCC GGATACCGGA AAGTCAGGCC GGTGTGGGGG CATACTCCTT CATGAATTAC
CCACAACGCA TACGCCTGCA AGGCATTTTG GACAGCGTGT CGGCAGGGAA GTTTCCGGCG
GGGAGTCTTG AACAAAAGGT GGGCGATTTT TACGCGTCCG GCATGGACGT AGCCGCCATT
GATAAACGGG GGTATGAACC TATAAAGCCC CTGCTTGCCC GCATCGACGC CCTGACCGAT
GTTCCTGCTT TATTGAAGCT GGTGGCCGAA GAGCAGAAAG TTGGCGACCG GTCCATCATC
GGTTTTTACG TAGGCCCCGA CAATAAACGC AGTTCGATCA ACATTGCCCA GTTTAGCCAA
ACCGGAATCG GATTGCCCGA ACGGGATTAT TATTTTAAGA CCGATTCATC GACTGGCTCG
GTTCAGAGAG CGTATCGGGA CTATCTCACC CGCCTGTTCG AATTGACCGG GACTGACGCA
GCAACGGCCC GTAAAAACGC TGCCCTTGCC TACGACATTG AAAAACAACT GGCCACCGCC
CACCGAACAA ACATTGAACG TCGGGATGTA AAGGCAAATT ACAACAAACT GGCGATTGCT
GATCTTGCCC AAAAACACGC TGTCCTGAAC TGGCCGACGT TATTAGCTAA CCTGGGCGTA
CAGGCCGATT CGGTTAACGT GGCGCAGCCA GGATACTACG ATAAGCTGAA CACGCTGTTG
ACATCCGTTC CCCTTGATGA TTGGAAAGTT TATTTAAAAG CCCATGCGCT GACCAACCAT
GCCAATTACT TAAGCCAACC CTTTGTGGAT GCGTCGTTTG CTTATTCGAA AATCCTGACC
GGGCAGGCGG TCAAGAAAAC CCGGGCCGAA GAAATGACGC AGGCGGTTGA TGGATCACTG
GGCGAGGCTC TGGCGCAGTT GTACGTGAAA AAATACTTTC CGGAAGAGGC CAAGAAACGA
ATGGCTGTTC TGGTCAACAA CCTCAAAAAA GCCTTTGAAG CCCGTATCAA TAAACTGGAC
TGGATGAGTG ATTCGACCAA GAGCAGGGCG AAGGAAAAAC TATACGCGTT CACCGAAAAA
ATCGGCTATC CTGACAAATG GCGAGATTAT TCGAAGGTAG ATGTAAAACG AGATGCTTAT
TTTGAGAACC GCCTGTCTGC CAATAAAAAT GATTATTTTC AGAGCCTTGC TAAAGTGGGA
AAGCCGGTAG ACCGAACGGA ATGGCATACG ACTCCGCCAA CGGTAACGGC CTACAACAAT
CCTCCGCTCA ATGAAATCGT TTTCCCGGCG GGTATCCTGC AACCCCCTTA TTTCGACGTG
AATGCCGATG ATGCACTGAA CTACGGCGGC ATCGGTATGG TCATCGGTCA CGAAATCACC
CACTCGTTCG ACGATCAGGG CGCGCAATTC GATAAAGTCG GTAACGTAAC GAACTGGTGG
ACCAAAGACG ATTACGCCAA ATTCAAAGCG AGAACAAATC AGGTAATTGA TCAATACAAC
AAATTTACCG TGCTGGACTC GGTACACGTA AAAGGGGCAT TAACCGTGGG CGAAAACACC
GCCGACATAG CGGGGGTGGC CATTGCCTAC GATGCCTTCA AGCTTACTGA GCAGGGAAAG
AGCACAGCGA AACTCGATGG CTTCACGCCC GACCAACGGT TCTTTATCTC GATCGCCCGA
ATTTGGCGCG TAAAAACCAG AGACGCCTAC ATGGGCATGT ACGTCAATAC GAACCCGCAC
TCACCCGCCA AGTGGCGCGT AAACGGCCCG CTGATGAACT TCACGCCGTT TTACAACGCG
TTTAACGTGC AACCAGGCGA TAAAATGTAC AAACCGGAAA AGGACCGGAT AGTGGTTTGG
TAA
 
Protein sequence
MTNYKNLVYV SLTVLLAGAC QRAATPTTTI PTTKRVVITG IDASKKPGDD FFKYANGIWN 
DTARIPESQA GVGAYSFMNY PQRIRLQGIL DSVSAGKFPA GSLEQKVGDF YASGMDVAAI
DKRGYEPIKP LLARIDALTD VPALLKLVAE EQKVGDRSII GFYVGPDNKR SSINIAQFSQ
TGIGLPERDY YFKTDSSTGS VQRAYRDYLT RLFELTGTDA ATARKNAALA YDIEKQLATA
HRTNIERRDV KANYNKLAIA DLAQKHAVLN WPTLLANLGV QADSVNVAQP GYYDKLNTLL
TSVPLDDWKV YLKAHALTNH ANYLSQPFVD ASFAYSKILT GQAVKKTRAE EMTQAVDGSL
GEALAQLYVK KYFPEEAKKR MAVLVNNLKK AFEARINKLD WMSDSTKSRA KEKLYAFTEK
IGYPDKWRDY SKVDVKRDAY FENRLSANKN DYFQSLAKVG KPVDRTEWHT TPPTVTAYNN
PPLNEIVFPA GILQPPYFDV NADDALNYGG IGMVIGHEIT HSFDDQGAQF DKVGNVTNWW
TKDDYAKFKA RTNQVIDQYN KFTVLDSVHV KGALTVGENT ADIAGVAIAY DAFKLTEQGK
STAKLDGFTP DQRFFISIAR IWRVKTRDAY MGMYVNTNPH SPAKWRVNGP LMNFTPFYNA
FNVQPGDKMY KPEKDRIVVW