Gene Slin_1256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1256 
Symbol 
ID8724989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1535692 
End bp1536819 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content53% 
IMG OID 
Productputative esterase 
Protein accessionYP_003386105 
Protein GI284036175 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.645173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGC TAATCATCTG CCTTAGCCTG TTGGCTACCG GACTGTCTCA GGCGCAGAAC 
TTTCCGGCTC GCACCCCGAC GCCCAACGAT ACCCTCGTTT CGGCAAGAAT TTTATCCGAT
AGCCGGTTGC GCTTTAGTAT CTACGCGCCC AAAGCGACCG AGGTAACGGT GAACGGCGAC
TTTCTGGCCG GGCAGCCAGC CGCCAGCCTA ACGAAACAGG CCAATGGCGT GTGGACAACC
ACCATTGGGC CATTGGCTCC CAATCTGTAT ACCTACGATT TTACGGTGGA CGGCATCAAA
ACGTTCGACC CGAAAAATCC GCAGTATAAA GAGAGCCTGA ACGGTTTGTC GAATCTGGTT
ACTATACCAG GGAAAGAGAC CGATTACCTG AGCGAAAAAA ATGTACCTCA TGGGCGGGTC
GAGATTGTCT GGTACCCGTC GGCTTCATTG GGTATCACCC GCCGAATGCA CGTGTACACC
CCACCGGGTT ATGAAAAATC CACGGCCAAA CTACCCGTGT TGTACCTACT GCACGGCGGG
GGCGATAACG ATGCCAGCTG GATGACCGTG GGCCGGGCCA ATTTCATTCT GGATAACCTG
CTGGCTGAAG GGAAGATGAA ACCGATGCTG GTGGTCATGC CTGCGGGCCA TACACCCACC
CCCGGCATAC ACATGGGGGC TGGCCCGGAG CAGGACCCGT TTTGCATTGA CTTTTTGGGA
AGCGTGATGC CATTCATTGA GAAGCAATAC CGCGTATCGA CCCGGCGCGA AGACCGGGCT
ATTGCGGGCC TGTCAATGGG GGGCATTCAG GTATTGAACA TTGCCCTCTG GCATCCGGAA
AAATTCAATT ATGTAATTCC TCTGAGTACC GGCTACTTCC CGCCAGTAAT TAAAGAACTG
GAAGAGAAGT ACCAGGCTGT GTTGAAAAAT CAGGAAATCA ACCGGATCAA CTTACTCTGG
ATTGCCATGG GCGGCCCAGC CGATATTGCC TATCAGAACA ACAAGAACAT GATGGCACTC
TTCGATAAGA ACCAGATAAA ATACCAGTAT GTCGAAGTGC CCGGCGGACA CTCGTTCCTG
GCGTGGCGCA ATAACCTGCA TACGTTTGCC CCGTTACTGT TTCGCTAA
 
Protein sequence
MKKLIICLSL LATGLSQAQN FPARTPTPND TLVSARILSD SRLRFSIYAP KATEVTVNGD 
FLAGQPAASL TKQANGVWTT TIGPLAPNLY TYDFTVDGIK TFDPKNPQYK ESLNGLSNLV
TIPGKETDYL SEKNVPHGRV EIVWYPSASL GITRRMHVYT PPGYEKSTAK LPVLYLLHGG
GDNDASWMTV GRANFILDNL LAEGKMKPML VVMPAGHTPT PGIHMGAGPE QDPFCIDFLG
SVMPFIEKQY RVSTRREDRA IAGLSMGGIQ VLNIALWHPE KFNYVIPLST GYFPPVIKEL
EEKYQAVLKN QEINRINLLW IAMGGPADIA YQNNKNMMAL FDKNQIKYQY VEVPGGHSFL
AWRNNLHTFA PLLFR