Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1248 |
Symbol | |
ID | 8724981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1523116 |
End bp | 1524120 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003386097 |
Protein GI | 284036167 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0782052 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGATACGA TTACGATAAA AGATATTGCC CGTGCGTTAA ATCTTTCGAC CTCAACCGTT TCGAGGGCGT TGCGGGATAG CTATGAAATT AATCCCGAAA CCAAACGGCT GGTCACCGAA TACGCAGAGC GGCTCAACTA CCGGCCCAAC CCCATTGCGC TGAGTTTAAA GGAAAACCGA AGCCGGGTTA TTGCGGTAAT CGTCCCGCAG ATTGCCAATA ATTTTTTCTC GCAGGTGATC AACGGCATAG AGGCCATTGC TTACAACCGG GGGTACCACG TCATTATTTT TCAGAGTCAC GAGTCGTATG AACGGGAGAT GCTAACGATA CAGCAGGCAG TGGCCCGCAA AGCCGATGGC CTGCTTATTT CGTTGTCGAG CGGCACGCTC GACGTAACTT ACCTGCGAGA GTTACAGGAT AAAAAACTGC CCATTGTTCT CTTTGACCGG GTATCGGCTC AACTGACCAG CCCCAGTGTA TCGGCCGATA ATTTTGCCGG TGCTTTTGCG GCTACCGAGC ATTTACTGCA AAGCGGTCGC CGACGGATTG CCCATCTGAC CATGCCCGCC CATATTTCAG TAACACAGGA ACGGCTGGCC GGTTATCGGG CGGCTCTGGA ACAGTATGGA ATAGACTATG ATGAGAACCT GGTGCGGTAC GGCTGGTTTG GGCAGGATGA AGTAGAGCCG CTGGTCGACG AACTATTGAC GTACACTCCC GATGCGTTTT TTGCGGCTGG CGACCGACTG ACATTGGGCT GTCTGGCTGC GTTGAAGAAC CGCAATATTG CCATTCCCGA CGACATGTCA CTGATCGGTT TCACGAACAG CACGGTTGCT GATCTGCTGG CTCCGCCCTT AACGACTGTC GAGCAACCGG CTCTTGATAT TGGTCAGATT GCCGCCGAAC AGTTAATCAA TCTGATTGAA GGCAAACAGC GTGATCCGCA GCCCAACCCG ATCAAAATTC CAACCCGGCT AAATATCCGG GCATCCTCGA AGTGA
|
Protein sequence | MDTITIKDIA RALNLSTSTV SRALRDSYEI NPETKRLVTE YAERLNYRPN PIALSLKENR SRVIAVIVPQ IANNFFSQVI NGIEAIAYNR GYHVIIFQSH ESYEREMLTI QQAVARKADG LLISLSSGTL DVTYLRELQD KKLPIVLFDR VSAQLTSPSV SADNFAGAFA ATEHLLQSGR RRIAHLTMPA HISVTQERLA GYRAALEQYG IDYDENLVRY GWFGQDEVEP LVDELLTYTP DAFFAAGDRL TLGCLAALKN RNIAIPDDMS LIGFTNSTVA DLLAPPLTTV EQPALDIGQI AAEQLINLIE GKQRDPQPNP IKIPTRLNIR ASSK
|
| |