Gene Slin_1223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1223 
Symbol 
ID8724956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1489869 
End bp1490819 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content54% 
IMG OID 
Productlipolytic protein G-D-S-L family 
Protein accessionYP_003386072 
Protein GI284036142 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0796712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.271135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCA TTCGACGGGT ACTCCTGCTT TTGTTTTTCA GTGGCGGGCT GACTAGCGTT 
TCTCAAGCCC AAACTCCGTT CCCCGCCAAT GTGCATCGGG TAGTATTTCT GGGCAACAGT
ATTACCTACG CTGGTACGTA CGTCACGGAT ATAGACGCTT ATTTCCGGTT GCGTTATCCC
AACCAGTCGA TTGAGTTCAT CAATGTCGGT CTGCCTAGCG AAACCGTTTC AGGGCTGTCG
GAGGAAGGTC ATGCCGATGG CAAATTCCCC CGCCCCGACC TGCACGAACG TTTGGAACGG
GTACTAAAAC TCACCAAGCC GGATTTCGTT TTCGCCTGTT ACGGCATGAA CGATGGTATT
TATCTGCCAC TGGATGAGAG CCGGTTTCAG AAATTCAGGG ATGGAATCAA CTGGCTTCAT
GCGGAAGTCG TCAAACTGGG CGTGCCTATC GTTCACCTGA CTCCGCCTAT TTATGATGAA
CAGCGGGGCA GCAGCAAAGG CTATGCGGCC GTCCTCGACC GCTACTCCGA TTGGCTACTG
AGCCAGAAAT CAACAGCGAA CTGGTCGGTC ATCGATCTTC ATTACCCCAT GAAAACGTAT
CTGGAAGCCC ACCGAAAGGT TGATGCAACC TTTGGGATTA ATGGGTTCGC GCTGGCGAAT
GATGGCGTCC ATCCCGGCGA TGTGGGCCAC TGGATCATGG CGAAAAGCAT CTTACTGGGA
ATGGGCGAGA AAGCCGTAGC CAGCGCCCCC GATTTGGCCG CTTCGGTAGC TATGGTTCCT
AATTCGGGGC AGATTATCAA ACTTATTGCC GCCCGTCAGA GCCTGATGAA AGATGCGTGG
CTGACCGCCA CCGGCCACAA ACGCCCCGGC ATGAACGTGG GCCTGCCCCT CACCGAAGCA
CAGGCCAAAG CCGCCGAACT GGATGCTCAG ATCAGGAAGT TGCTGCCCTG A
 
Protein sequence
MTTIRRVLLL LFFSGGLTSV SQAQTPFPAN VHRVVFLGNS ITYAGTYVTD IDAYFRLRYP 
NQSIEFINVG LPSETVSGLS EEGHADGKFP RPDLHERLER VLKLTKPDFV FACYGMNDGI
YLPLDESRFQ KFRDGINWLH AEVVKLGVPI VHLTPPIYDE QRGSSKGYAA VLDRYSDWLL
SQKSTANWSV IDLHYPMKTY LEAHRKVDAT FGINGFALAN DGVHPGDVGH WIMAKSILLG
MGEKAVASAP DLAASVAMVP NSGQIIKLIA ARQSLMKDAW LTATGHKRPG MNVGLPLTEA
QAKAAELDAQ IRKLLP