Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1223 |
Symbol | |
ID | 8724956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1489869 |
End bp | 1490819 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | lipolytic protein G-D-S-L family |
Protein accession | YP_003386072 |
Protein GI | 284036142 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0796712 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.271135 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACCA TTCGACGGGT ACTCCTGCTT TTGTTTTTCA GTGGCGGGCT GACTAGCGTT TCTCAAGCCC AAACTCCGTT CCCCGCCAAT GTGCATCGGG TAGTATTTCT GGGCAACAGT ATTACCTACG CTGGTACGTA CGTCACGGAT ATAGACGCTT ATTTCCGGTT GCGTTATCCC AACCAGTCGA TTGAGTTCAT CAATGTCGGT CTGCCTAGCG AAACCGTTTC AGGGCTGTCG GAGGAAGGTC ATGCCGATGG CAAATTCCCC CGCCCCGACC TGCACGAACG TTTGGAACGG GTACTAAAAC TCACCAAGCC GGATTTCGTT TTCGCCTGTT ACGGCATGAA CGATGGTATT TATCTGCCAC TGGATGAGAG CCGGTTTCAG AAATTCAGGG ATGGAATCAA CTGGCTTCAT GCGGAAGTCG TCAAACTGGG CGTGCCTATC GTTCACCTGA CTCCGCCTAT TTATGATGAA CAGCGGGGCA GCAGCAAAGG CTATGCGGCC GTCCTCGACC GCTACTCCGA TTGGCTACTG AGCCAGAAAT CAACAGCGAA CTGGTCGGTC ATCGATCTTC ATTACCCCAT GAAAACGTAT CTGGAAGCCC ACCGAAAGGT TGATGCAACC TTTGGGATTA ATGGGTTCGC GCTGGCGAAT GATGGCGTCC ATCCCGGCGA TGTGGGCCAC TGGATCATGG CGAAAAGCAT CTTACTGGGA ATGGGCGAGA AAGCCGTAGC CAGCGCCCCC GATTTGGCCG CTTCGGTAGC TATGGTTCCT AATTCGGGGC AGATTATCAA ACTTATTGCC GCCCGTCAGA GCCTGATGAA AGATGCGTGG CTGACCGCCA CCGGCCACAA ACGCCCCGGC ATGAACGTGG GCCTGCCCCT CACCGAAGCA CAGGCCAAAG CCGCCGAACT GGATGCTCAG ATCAGGAAGT TGCTGCCCTG A
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Protein sequence | MTTIRRVLLL LFFSGGLTSV SQAQTPFPAN VHRVVFLGNS ITYAGTYVTD IDAYFRLRYP NQSIEFINVG LPSETVSGLS EEGHADGKFP RPDLHERLER VLKLTKPDFV FACYGMNDGI YLPLDESRFQ KFRDGINWLH AEVVKLGVPI VHLTPPIYDE QRGSSKGYAA VLDRYSDWLL SQKSTANWSV IDLHYPMKTY LEAHRKVDAT FGINGFALAN DGVHPGDVGH WIMAKSILLG MGEKAVASAP DLAASVAMVP NSGQIIKLIA ARQSLMKDAW LTATGHKRPG MNVGLPLTEA QAKAAELDAQ IRKLLP
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