Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1214 |
Symbol | |
ID | 8724947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1473019 |
End bp | 1474263 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | NusA antitermination factor |
Protein accession | YP_003386063 |
Protein GI | 284036133 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.75759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGTG GACTATTAAT TGAATCGTTT GCTGATTTTG CCCGGTCGAA GAACATTGAT CGGCCTACCA TGATCGCTAT TCTGGAAGAT GTTTTTCGGA CCATGATTCG TAAGAAATAT GGCACCGACG AAAATTTCGA CGTGATCATC AACGCCGAAA GTGGTGATCT CGAAATGTGG CGGACGCGCG AAATTGTGGA TGATAACTCG GAAGATATCT GGGACTATGA CAAAATCCCA CTCGCCGAAG CACGTAAAAT TCAGGATGAC TTTGAGGTGG GTGAACAGGT TGCCGAGGAG GTGAAGCTGG ACGATTTTGG CCGTCGGGTA GTGCAAACAG CCCGTCAGAC ACTCATCCAG AAGATAAAGG ACATGGAGAA AGAACTCCTT TATCAAAAGT ATAAGGACCA GGTTGGTGAT TTGGTGACTG CTGAAGTATA TCAGTTGCTG AAGCACGAGA TTATTCTGGT TGATGGTGAG AGCAACGAAT TGAGTTTACC CCGCACGGAG CAGATTTCTA AAGATCGGTA CCGGAAGGGT GAGCCAGTAA AAGCGGTCAT TAGCCGGGTC GATATGCTCA ACGGTACACC TAAAATTGTA CTGTCCCGTA CATCGCCTGT ATTCCTGGAG CGCCTGTTTG AAATCGAAGT ACCAGAGATT TATGATGGCC TGATATCGAT TCGTAAAATC GTTCGGGAGC CGGGCGAACG GGCTAAAGTT GCCGTTGAAT CGTACGACGA CCGGATTGAC CCCGTTGGTG CCTGCGTAGG TATGAAAGGA TCACGGATTC ACGGTATCGT ACGCGAACTC GGCAACGAAA ACATCGACGT GATCAACTAT ACCGAAAATC TGGAACTGCT TATCAGCCGG GCGCTTAGCC CCGCCAAAAT CAGTTCGATG CAGATTGACC GGGAAACAAA ACGCGTATCT GTTTTCCTGA AGCCCGATCA GGTTTCGCTG GCTATCGGTA AAGGTGGTCA GAACATTAAG CTGGCCGGCC GGTTGGTAGA TATGGAAATC GACGTATTCC GGGATAACGA AGGACAGGAA GATGACGAAG ACGTTGACCT GATGGAATTC TCGGATGAGA TCGACGAGTG GATGATCCAG GAACTTCGAA AAGTGGGTCT GGATACCGCT AAAAGCGTAC TGGCCCTGAA TAAAGAGGAG CTCGTTCGCC GTACCGATCT GGAAGAAGAT ACCGTCGAAG AGATTTTGAA TATCCTGAAA CAGGAATTTG AGTAA
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Protein sequence | MTSGLLIESF ADFARSKNID RPTMIAILED VFRTMIRKKY GTDENFDVII NAESGDLEMW RTREIVDDNS EDIWDYDKIP LAEARKIQDD FEVGEQVAEE VKLDDFGRRV VQTARQTLIQ KIKDMEKELL YQKYKDQVGD LVTAEVYQLL KHEIILVDGE SNELSLPRTE QISKDRYRKG EPVKAVISRV DMLNGTPKIV LSRTSPVFLE RLFEIEVPEI YDGLISIRKI VREPGERAKV AVESYDDRID PVGACVGMKG SRIHGIVREL GNENIDVINY TENLELLISR ALSPAKISSM QIDRETKRVS VFLKPDQVSL AIGKGGQNIK LAGRLVDMEI DVFRDNEGQE DDEDVDLMEF SDEIDEWMIQ ELRKVGLDTA KSVLALNKEE LVRRTDLEED TVEEILNILK QEFE
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