Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1174 |
Symbol | |
ID | 8724907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1433507 |
End bp | 1434235 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | 4-diphosphocytidyl-2C-methyl-D- erythritolsynthase |
Protein accession | YP_003386024 |
Protein GI | 284036094 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGACC CCTTACTACC TACTACTAAT TTTTTTGCCA TCATCGTTGC CGGCGGCAGT GGCAGCCGAA TGAAGTCGGA CGTACCCAAA CAGTTTCTGC TTCTCAACGG CAAACCCATC CTTCAGCATA CTATCGAACA ATTTCTGGCG GTTCAACTCC CCGCCCGGCC TTTGTCCTCT CAGACAACGG AAATGACCGT ATCCGCCCAG CGTTCGACGG TCAGCATTAT TGTTGTACTA CCCGCCCGGG ATATACCCAT CTGGAATAAA CTGTGTGAAG AGCACAATTT CCATCCTGAC ATTCAGACGG TCATTGGCGG CAACAGCCGA TTTCAGTCGG TACGCAACGG GCTTCAGGCG ATAGACGCTC CCGATGGGTT AGTGGCGGTT CACGATGGTG TCCGGCCTTT TGTCACGCCC GATATTATTC AGGCTGGTTT TGAAACGGCC GCCCGGACCG GTTCAGCTGT AACCTGTGTG CCGGTTAAGG ATTCGGTACG TGTTGTTGGA GCAGATGGCA TTAGCCGTGC CGTCGACCGC GCTCAATACC GACTGGTGCA AACGCCCCAA ACCTTTCGAC TGGGCCTGTT CCGGCAGGCT TTTCAAAGCG AGGAGCAGGC TTTCTTCACC GACTGCGCCA GCGTTGTCGA GTTTGCCGGT TTCCCAATCA CGCTGATTGA TGGCGCTTAC GAAAACATCA AAATTACCAC CCCGGACGAC TTAAGGTAA
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Protein sequence | MTDPLLPTTN FFAIIVAGGS GSRMKSDVPK QFLLLNGKPI LQHTIEQFLA VQLPARPLSS QTTEMTVSAQ RSTVSIIVVL PARDIPIWNK LCEEHNFHPD IQTVIGGNSR FQSVRNGLQA IDAPDGLVAV HDGVRPFVTP DIIQAGFETA ARTGSAVTCV PVKDSVRVVG ADGISRAVDR AQYRLVQTPQ TFRLGLFRQA FQSEEQAFFT DCASVVEFAG FPITLIDGAY ENIKITTPDD LR
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