Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1141 |
Symbol | |
ID | 8724874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1394509 |
End bp | 1395609 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | ATPase-like protein |
Protein accession | YP_003385991 |
Protein GI | 284036061 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.956923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.756779 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAGC AACACCTCAC CTACTTCAAA ATCGAGAACT TCAAGCGATT CGATTCCTTC GAGATGAGCA ATCTGGGGCA GTTTAACCTG ATTGTGGGGG ACAATAATGT GGGGAAGACA TCGGTACTAG AAGCGTTGAC GTTTGATGAG AATCTTGTTT ACTGGCGATC AAACCTTCAA AATACTACAA ACTTTAGAGG TTTTTTTGGA GATCAAGTTA ATCTAAAGCC AGAAGGTATT AAAGACGCAG AAGCTTGGAA GCTAATTTTT AAAGATACTG TAAAACCCCT AATAGTTACG GCTAATAGCA ACCATCTTTT ACATATGTCT TTATCATTAA TCTCATATAA AGATTTAAGT AGTTCAGAAG TAGAAACGAT AAAAAAGCAC TCCATAAGTA CCATCCCACA ATTGTGGATT AAGCAAGAAT TCCACAATAA GGTAGTTTCT CGATTTCCAC AATTATTATC TGCTTACTTT GAAGATGTTG CGTATCTGGA TGATCCTAGC TATATACCAT TTATTCCTGT AAACTTAAGT TATGGCGATG ATCTTGTCGA CTATTTCTAT GAGTATATAA ATGTAGACAA AGTTTTAAAG AAAGAATTGG AAGAAAATTT AAAGAATCTG ATTCCCAATC TTGAAGAAGT CAGAGTTCAT CGATTTTCTA AAACTCACGA GGTGCTTTGT GTAACCTTGA CAAATAGTAA TGGGATTTAT CCGCTAGTAA GATATGGAGA TGGAACTGTC AAAACAACTC GCATATTGAT GGAAACCTTA TTAGCAAAAA ATAAGCGGTT TATGATTGAT GAAATCGGAG CAGGCATCCA TTTTTTGAGA CTTAAAGATT TTTGGCAAAC AATCATTCAA CTCTGCGCTC AAAATAACAC CCAGCTCTTC GCCACTACCC ATAGCCTTGA ATGCCAACAA GCATTTATCG AAGCCTTAGA AGAGCCAGAA ATGCAGCAGT ATCAAAAAGA CGCCCGCAAT ATTTCATTGA TCGAGAATAA ACAGGGTGAA GTAAAAGCTG TTACCTATGA TTTTGGCCAG TTTGAATACG CGCTGAATAT TGGCTTTAAT ACACGGGGTG GCGCACGATG A
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Protein sequence | MEKQHLTYFK IENFKRFDSF EMSNLGQFNL IVGDNNVGKT SVLEALTFDE NLVYWRSNLQ NTTNFRGFFG DQVNLKPEGI KDAEAWKLIF KDTVKPLIVT ANSNHLLHMS LSLISYKDLS SSEVETIKKH SISTIPQLWI KQEFHNKVVS RFPQLLSAYF EDVAYLDDPS YIPFIPVNLS YGDDLVDYFY EYINVDKVLK KELEENLKNL IPNLEEVRVH RFSKTHEVLC VTLTNSNGIY PLVRYGDGTV KTTRILMETL LAKNKRFMID EIGAGIHFLR LKDFWQTIIQ LCAQNNTQLF ATTHSLECQQ AFIEALEEPE MQQYQKDARN ISLIENKQGE VKAVTYDFGQ FEYALNIGFN TRGGAR
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